Job Description P07813 Confidence 100.00% Date Thu Jan 5 11:00:33 GMT 2012 Rank 26 Aligned Residues 186 % Identity 42% Template c3o0aB_ PDB info PDB header:ligase Chain: B: PDB Molecule:leucyl-trna synthetase subunit alpha; PDBTitle: crystal structure of the wild type cp1 hydrolitic domain from aquifex2 aeolicus leucyl-trna Resolution 1.77 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		228	.	230	.	.	.	.	.	.	.	.	.	240																						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.								.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Query Sequence		E	G	V	E	I	T	F	N	V	N	D	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	L	T	V	Y	T	T	R	P	D	T	F	M	G	C	T	Y	L	A	V	A	A	G	H	P	L	A	Q	K	A	A	E	N	N	P	E	.	.	.	.	.	.	.	L	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	A	L	I	R	F	Y	V	E	I	E	E	P	E	K	F	L	N	C	V	P	E	E	L	K	E	T	L	L	K	E	K	R	I	Y	I	D	V	F	T	T	R	P	D	T	V	F	G	A	T	F	V	V	L	A	P	E	H	P	L	V	P	V	L	A	C	I	G	E	R	L	G	N	A	C	Y	S	D	V
Template Known Secondary structure													S		G	G	G	T	G	G	G	S												S									S		G	G	G	G	G	G								T	T		T													T	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	I	D	E	C	R	N	T	K	V	A	E	A	E	M	A	T	M	E	K	K	G	V	D	T	G	F	K	A	V	H	P	L	T	G	E	E	I	P	V	W	A	A	N	F	V	L	M	E	Y	G	T	G	A	V	M	A	V	P	G	H	D	Q	R	D	Y	E	F	A	S	K	Y	G	L	N	I	K	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	F	V	E	K	M	K	K	M	S	T	R	E	R	T	M	E	E	D	K	E	G	V	F	L	G	V	Y	A	T	N	P	A	N	G	E	K	I	P	V	W	S	A	N	Y	V	L	Y	E	Y	G	T	G	A	I	M	C	V	P	A	H	D	Q	R	D	W	E	F	A	K	K	Y	D	L	P	I	K	V	V
Template Known Secondary structure										T	S							S		S	S													T	T	T										T	T	S		T	T	S	T	T	S						T	T	T												T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	A	A	D	G	S	E	P	D	L	S	Q	Q	A	L	T	E	K	G	V	L	F	N	S	G	E	F	N	G	L	D	H	E	A	A	F	N	A	I	A	D	K	L	T	A	M	G	V	G	E	R	K	V	N	Y
Query Conservation
Alig confidence												.	.
Template Conservation												.	.
Template Sequence		V	K	P	E	G	A	W	D	F	E	.	.	K	G	A	Y	E	G	K	G	T	L	V	N	S	D	G	F	D	G	L	D	S	E	T	A	K	R	K	I	T	E	W	L	Q	D	R	G	L	G	E	K	K	V	S	Y
Template Known Secondary structure					S	S				T	T	.	.	T					S						S		G	G	G	T	T		B															T	T	S					S
Template Predicted Secondary structure												.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.			.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions