Job Description P07813 Confidence 92.10% Date Thu Jan 5 11:00:33 GMT 2012 Rank 98 Aligned Residues 185 % Identity 14% Template c3n9iA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from yersinia pestis2 co92 Resolution 1.95 Å

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		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	V	D	I	Y	I	G	G	I	E	H	A	I	M	H	L	L	Y	F	R	F	F	H	K	L	M	R	D	A	G	M	V	N	S	D	E	P	A	K	Q	L	L	C	Q	G	M	V	L	A	D	A	F	Y	Y	V	G	E	N	G	E	R	N	W	V	S	P	V	D	A	I	V	E	R	D	E	K	G	R	I
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Q	T	N	Q	V	P	V	G	E	D	Q	K	Q	H	L	E	L	S	R	D	I	A	S	R	F	N	N	L	Y	G	D	I	F	K	I	P	E	P	F	I	P	K	A	G	A	R	V	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T		S						G	G	G																			S	S		S															B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		602	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.				.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.			.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.																																	.	.
Query SS confidence																								.	.	.																																	.	.
Query Sequence		V	K	A	K	D	A	A	G	H	E	L	V	Y	T	G	M	S	K	M	S	K	S	.	.	.	K	N	N	G	I	D	P	Q	V	M	V	E	R	Y	G	A	D	T	V	R	L	F	M	M	F	A	S	P	A	D	M	T	.	.	L	E	W	Q	E	S	G	V	E	G	A	N	R	F	L	K	R	V	W	K	L
Query Conservation																								.	.	.																																	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.												.	.	.										.	.	.	.	.																			.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	L	Q	D	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	E	L	L	E	.	.	.	.	.	D	P	K	S	V	V	K	K	I	K	R	A	M	T	D	S	D	E	P	A	L	I	R	Y	D	V	E	K	K	A	G	V	S	N	L	L	D	I	L	S	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	S	S		T	T	S	B			T	T		S		G	G	G			B	T	T	S	.	.	.	.	.											T							S	S							T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template SS confidence
													201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.						.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	E	H	T	A	K	G	D	V	A	A	L	N	V	D	A	L	T	E	N	Q	K	A	L	R	R	D	V	H	K	T	I	A	K	V	T	D	D	I	G	R	R	Q	T	F	N	T	A	I	A	A	I	M	E	L	M	N	K	L	A	K	A	P	T	D	G	E	Q	D	R	A	L	M	Q	E	A	L	L	A
Query Conservation
Alig confidence																																																																.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		V	T	G	Q	S	I	P	E	L	E	A	Q	F	T	G	Q	M	Y	G	H	L	K	G	A	V	A	D	A	V	S	G	M	L	S	E	L	Q	E	R	Y	R	T	Y	R	E	D	E	A	L	L	Q	D	V	M	R	E	G	A	A	K	A	R	.	.	.	.	.	A	R	A	Q	V	T	L	A	K	V	Y	E	A
Template Known Secondary structure														T	T	T																														T																		.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.						.	.	.	330	.	.	.	.	.	.	.	.	.
		757
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		340

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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