Job Description P07813 Confidence 94.18% Date Thu Jan 5 11:00:33 GMT 2012 Rank 87 Aligned Residues 124 % Identity 16% Template c3hzrD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase homolog from entamoeba histolytica Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.								.	.	.	20	.	.	.	.	.	.	.	.	.									30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Query Sequence		E	E	I	E	S	K	V	Q	L	.	.	.	.	.	.	.	H	W	D	E	K	R	T	F	E	V	T	E	D	.	.	.	.	.	.	.	.	E	S	K	E	K	Y	Y	C	L	S	M	L	P	Y	P	S	G	R	L	H	M	G	H	V	R	N	Y	T	I	G	D	V	I	A	R	Y	Q	R	M	L	G	K	N
Query Conservation											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.															.															.	.	.
Template Conservation																																																					.															.	.	.
Template Sequence		P	Q	Q	I	Q	R	I	E	K	L	S	G	K	A	P	H	H	Y	L	S	R	G	V	F	L	A	E	K	S	L	D	K	F	L	D	D	V	E	A	K	K	P	T	F	I	F	I	Q	K	Y	P	.	Q	K	E	V	A	L	E	E	Y	I	T	L	E	F	.	.	.	A	R	Y	L	Q	D	A	F	N	I	Q
Template Known Secondary structure													T	S								T	T	S					S	S										T	T												.		S	S		B	G	G	G							.	.	.
Template Predicted Secondary structure																																																					.															.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	Q	P	I	G	W	D	A	F	G	L	P	A	E	G	A	A	V	K	N	N	T	A	P	A	P	W	T	Y	D	N	I	A	Y	M	K	N	Q	L	K	M	L	G	F	G	Y	D	W	S	R	E	L	A	T	C	T	P	E	Y	Y	R	W	E	Q	K	F	F	T	E	L	Y	K
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.																																.	.
Template Conservation								.	.	.	.	.	.	.	.																																.	.
Template Sequence		V	I	I	Q	I	L	.	.	.	.	.	.	.	.	D	D	I	K	V	L	N	R	E	A	T	I	N	E	A	S	K	M	S	N	D	L	M	K	Y	I	L	A	F	G	F	.	.	N	E	D	K	T	F	I	Y	T	D	Y	Q	Y	F	G	K	M	Y	R	T	I	S	L	V	E	K
Template Known Secondary structure								.	.	.	.	.	.	.	.							T	T	S																				T			.	.		G	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																																.	.
Template SS confidence
		112	.	.	.	.	.									.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions