Job Description P07813 Confidence 100.00% Date Thu Jan 5 11:00:33 GMT 2012 Rank 27 Aligned Residues 185 % Identity 21% Template c2wfdB_ PDB info PDB header:ligase Chain: B: PDB Molecule:leucyl-trna synthetase, cytoplasmic; PDBTitle: structure of the human cytosolic leucyl-trna synthetase2 editing domain Resolution 3.25 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.												.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																																																							.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.																																																							.
Query Sequence		G	R	S	E	G	V	E	I	T	F	N	V	N	D	.	.	.	.	.	.	.	.	.	.	.	Y	D	N	T	L	T	V	Y	T	T	R	P	D	T	F	M	G	C	T	Y	L	A	V	A	A	G	H	P	L	A	Q	K	A	A	E	N	N	P	E	L	A	A	F	I	D	E	C	R	N	T	K	V	A	E	.
Query Conservation																.	.	.	.	.	.	.	.	.	.	.																																																							.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																																																							.
Template Conservation
Template Sequence		G	P	Q	E	Y	T	L	L	K	L	K	V	L	E	P	Y	P	S	K	L	S	G	L	K	G	K	N	I	F	L	V	A	A	T	L	R	P	E	T	X	F	G	Q	T	N	C	W	V	R	P	D	X	K	Y	I	G	F	E	T	V	N	G	D	I	F	I	C	T	Q	K	A	A	R	N	X	S	Y	Q	G	F
Template Known Secondary structure															S	S			G	G	G	G	G	G	T	T	S									S		G	G	G	G	G	G								S	S	S								T	T	S															T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
								293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.											.	.	.	350	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																								.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																								.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	E	M	A	T	M	E	K	K	G	V	D	T	G	F	K	A	V	H	P	L	T	G	.	E	E	I	P	V	W	A	A	N	F	V	L	M	E	Y	G	T	G	A	V	M	A	V	P	G	H	D	Q	R	D	Y	.	.	.	.	.	.	.	.	.	.	E	F	A	S	K	Y	G	L	N
Query Conservation		.	.	.	.	.	.																								.																																.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																								.																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	D	N	G	V	V	P	V	V	K	E	L	X	G	E	E	I	L	G	A	S	L	S	A	P	L	T	S	Y	K	V	I	Y	V	L	P	X	L	T	I	K	E	D	K	G	T	G	V	V	T	S	V	P	S	D	S	P	D	D	I	A	A	L	R	D	L	K	K	K	Q	A	L	R	A	K	Y	G	I	R
Template Known Secondary structure		S	S	S	T	T										S	G	G	G	T	T						S	S		S	S	S								S				S	S	S	S		S	S					T	T	T																			G	G	G
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.								.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380																									.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	P	V	I	L	A	A	D	.	.	.	.	.	.	.	G	S	E	P	D	L	S	Q	Q	A	L	T	E	K	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	N	S	G	E	F	N	G	L	D	H	E	A	A	F	N	A	I	A	D	K	L	T
Query Conservation											.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	X	V	L	P	F	E	P	V	P	V	I	E	I	P	G	F	G	N	L	S	A	V	T	I	C	D	E	L	K	I	Q	S	Q	N	D	R	E	K	L	A	E	A	K	E	K	I	Y	L	K	G	F	Y	E	G	I	X	L	V	D	G	F	K	G	Q	K	V	Q	D	V	K	K	T	I	Q	K	K	X	I
Template Known Secondary structure		G	G	G	T	T	T									B	T	T	T	B	S	S									T	T			S	T	T																								S	T	T	S	T	T		B
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		405	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	G	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	G	D	A
Template Known Secondary structure			T	T	S
Template Predicted Secondary structure
Template SS confidence
		500	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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