Job Description P07813 Confidence 93.40% Date Thu Jan 5 11:00:33 GMT 2012
Rank 94 Aligned Residues 99
% Identity 15% Template c2ts1A_
PDB info
PDB header: ligase (synthetase)Chain: A: PDB Molecule: tyrosyl-trna synthetase;
PDBTitle: structure of tyrosyl-t/rna synthetase refined at 2.3 angstroms2 resolution. interaction of the enzyme with the tyrosyl adenylate3 intermediate
Resolution 2.30 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
32 . . . . . . . 40 . . . . . . .
. . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 .
. . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . .
Predicted Secondary structure  
. .
Query SS confidence  
.
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Query Sequence  
K E K Y Y C L S M L P Y P S G R .
L H M G H V R N Y T I G D V I A R Y Q R M L G K N V L Q P I G W D A .
F G L P A E G A A V K N N T A P A P W T Y D N I A Y M K
Query Conservation  
                .                                     .                                      
Alig confidence  
. . . . . .
Template Conservation  
                .               . . .                                                                          
Template Sequence  
E E R V T L Y C G F D .
P T A D S L H I G H L A T I L T .
.
.
M R R F Q Q A G H R P I A L V G G A T G L I G D P S G K K S E R T L N A K E T V E A W S A R I K E
Template Known Secondary structure  
S . S S S S B G G G . . . T T T T G G G T T T S S
Template Predicted Secondary structure  
. . . .
Template SS confidence  
   
28 . 30 . . . . . . . .
. 40 . . . . . . . . . 50 . . . .
. . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . .
 
   
110 . . . . . . . . . 120 . . . . . . . . . 130 . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
N Q L K M L G F G Y D W S R E L A T C T P E Y Y R
Query Conservation  
                                 
Alig confidence  
Template Conservation  
                             
Template Sequence  
Q L G R F L D F E A D G N P A K I K N N Y D W I G
Template Known Secondary structure  
T T S S S S S S S T T
Template Predicted Secondary structure  
Template SS confidence  
   
104 . . . . . 110 . . . . . . . . . 120 . . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]