Job Description P07813 Confidence 95.84% Date Thu Jan 5 11:00:33 GMT 2012 Rank 72 Aligned Residues 110 % Identity 21% Template c2rkjM_ PDB info PDB header:ligase/rna Chain: M: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: cocrystal structure of a tyrosyl-trna synthetase splicing2 factor with a group i intron rna Resolution 4.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20																.	.	.	.	.	.	.	.	.	30	.	.									.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Query Sequence		E	E	I	E	S	K	V	Q	L	H	W	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	T	F	E	V	T	E	D	E	S	K	.	.	.	.	.	.	.	.	E	K	Y	Y	C	L	S	M	L	P	Y	P	S	G	R	L	H	M	G	H	V	R	N	Y	T	I	G	D	V	I	A	R
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		N	E	A	E	E	N	W	Q	A	R	A	E	A	I	K	K	G	K	K	Q	N	T	W	D	L	F	E	E	R	G	Y	V	K	D	T	A	G	T	K	E	H	I	A	E	L	M	R	T	R	R	I	G	A	Y	V	G	I	D	P	T	A	P	S	L	H	V	G	H	L	L	P	L	M	P	.	.	.	.	L	F
Template Known Secondary structure																	T	T	S	S									T	T	T			S				S												S										T	T	S	S	S		B	G	G	G							.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		Y	Q	R	M	L	G	K	N	V	L	Q	P	I	G	W	D	A	F	G	L	.	.	.	P	A	E	G	A	A	V	K	N	N	T	A	P	A	P	W	T	Y	D	N	I	A	Y	M	K	N	Q	L	K	M	L	G	F	G	Y	D	W	S	R
Query Conservation																						.	.	.
Alig confidence																.						.	.	.			.
Template Conservation																.											.
Template Sequence		W	M	Y	L	E	G	Y	K	A	F	T	L	I	G	.	G	S	T	A	K	I	G	D	P	T	.	G	D	A	T	M	N	M	T	K	I	H	Y	Q	L	K	K	L	W	E	N	V	D	T	Q	M	R	A	R	G	Y	E	A	D	W	A	R
Template Known Secondary structure							T									.	T	T	G	G	G	T					.																												T	T					S	S
Template Predicted Secondary structure																.											.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions