Job Description P07813 Confidence 98.61% Date Thu Jan 5 11:00:33 GMT 2012 Rank 54 Aligned Residues 115 % Identity 20% Template c1irxA_ PDB info PDB header:ligase Chain: A: PDB Molecule:lysyl-trna synthetase; PDBTitle: crystal structure of class i lysyl-trna synthetase Resolution 2.60 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	K	E	K	Y	Y	C	L	S	M	L	P	Y	P	S	G	R	L	H	M	G	H	V	R	N	Y	T	I	G	D	V	I	A	R	Y	Q	R	M	L	G	K	N	V	L	Q	P	I	G	W	D	A	F	G	L	.	.	P	A	E	G	A	A	V	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																																										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		G	E	K	E	K	Y	V	V	E	S	G	I	T	.	P	S	G	Y	V	H	V	G	N	F	R	E	L	F	T	A	Y	I	V	G	H	A	L	R	D	K	G	Y	E	V	R	H	I	H	M	W	D	D	Y	D	R	F	R	K	V	P	R	N	V	P	Q	E	W	K	D	Y	L	G	M	P	I	S	E	V	P	D
Template Known Secondary structure					S										.		S	S																						T	T	T											T	T	S	B						S	S	S		G	G	G	G	G	G	T	T	S	B	G	G	G	S
Template Predicted Secondary structure															.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
			94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure		.																																			.
Query SS confidence		.																																			.
Query Sequence		.	N	T	A	P	A	P	W	T	Y	D	N	I	A	Y	M	K	N	Q	L	K	M	L	G	F	G	Y	D	W	S	R	E	L	A	T	.	C	T	P	E	Y	Y	R	W	E	Q	K	F	F	T	E	L	Y	K
Query Conservation		.																																			.
Alig confidence		.																																			.
Template Conservation
Template Sequence		P	W	G	C	H	E	S	Y	A	E	H	F	M	R	K	F	E	E	E	V	E	K	L	G	I	E	V	D	L	L	Y	A	S	E	L	Y	K	R	G	E	Y	S	E	E	I	R	L	A	F	E	K	R	D	K
Template Known Secondary structure		T	T	S	S	S	S	S															T	T	T														T	T	T	T										T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions