 |
Job Description | P31677 | Confidence | 73.71% | Date | Thu Jan 5 11:48:33 GMT 2012 |
Rank | 62 | Aligned Residues | 101 |
% Identity | 19% | Template | d1dxya1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Formate/glycerate dehydrogenases, NAD-domain
|
Resolution | 1.86 |
|
 |
  |   |
292 | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | |
|
. | . | 360 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . |
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Y | T | Q | I | A | P | T | S | R | G | D | V | Q | A | Y | Q | D | I | R | H | Q | L | E | N | E | A | G | R | I | N | G | K | Y | G | Q | L | G | W | T | P | L | Y | Y | L | N | Q | H | F | D | R | K | L | L | M | K | I | F | R | Y | S | D | V | G | L | V | . |
. |
T | P | L | R | D | G | M | N | L | V | A | K |
Query Conservation |   |
  |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|
|   |
|   | . | . |
|
|   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |
|   | . | . | . | . | . | . | . | . | . |
|
|   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |   |
|
|
|   |   |
|   |   |
|
|   |   |
Template Sequence |   |
T | V | G | V | M | G | T | G | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
I | G | Q | V | A | I | K | L | F | K | G | F | G | A | K | V | I | A | Y | D | P | Y | P | M | K | G | D | H | P | D | F | D | Y | V | S | L | E | D | L | F | K | Q | S | D | V | I | D | L | H | V | P | G | I | E | Q | N | T | H | I | I | N | E |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |
|
| S | S |
|
| T | T |
|  |  |
|
|  |  |  |  |  |  |  |
| S |  |  |  |  |
|
|
|
|
| G | G | G | T | T | S | B |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
  |
  |   |
370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Y | V | A | A | Q | D | P | A | N | P | G | V | L | V | L | S | Q | F | A | G | A | A | N | E | L | T | S | A | L | I | V | N | P | Y | D | R | D | E | V | A | A | A | L | D | R |
Query Conservation |   |
|
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   | . | . | . |
|
|   |
|
| . | . |
|   |
|
|
|   |
|
| . | . | . | . | . | . | . | . | . |
|   |   |
|
|   |   |
|
|   |   |
Template Sequence |   |
A | A | F | N | L | M | K | P | . |
. |
. |
G | A | I | V | I | . |
. |
N | T | A | R | P | N | L | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | T | Q | A | M | L | S | N | L | K | S |
Template Known Secondary structure |   |
 |  |  |  |  | S |
| T | . | . | . | T |  |  |  |  | . | . |  |
| S |
| T | T | S | B | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  | . | . |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
218 | . | 220 | . | . | . | . | . | |
|
|
. | . | . | . | 230 | |
|
. | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 240 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|