Job Description P31677 Confidence 53.23% Date Thu Jan 5 11:48:33 GMT 2012 Rank 66 Aligned Residues 145 % Identity 10% Template c3tovB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase family 9; PDBTitle: the crystal structure of the glycosyl transferase family 9 from2 veillonella parvula dsm 2008 Resolution 2.98 Å

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		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		P	P	K	L	A	Q	L	K	A	E	L	K	N	V	Q	N	I	F	S	V	E	R	L	D	Y	S	K	G	.	.	L	P	E	R	F	L	A	Y	E	A	L	L	E	K	Y	P	Q	H	H	G	K	I	R	Y	T	Q	I	A	P	T	S	R	G	D	V	Q	A	Y	Q	D	I	R	H	Q	L	E	N	E	A	G
Query Conservation																														.	.
Alig confidence																														.	.																		.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	E	F	Y	S	S	H	G	L	T	D	T	D	I	L	I	G	F	N	I	G	S	A	V	P	E	K	R	W	P	A	E	R	F	A	H	V	A	D	Y	F	G	R	L	G	Y	K	.	.	.	.	.	.	T	V	F	F	G	G	P	X	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T	T			T	T											S	S	G	G	G																	T	T			.	.	.	.	.	.							G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.							.	.	.	220	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		R	I	N	G	K	Y	G	Q	L	G	W	T	P	L	Y	Y	L	N	Q	H	F	D	R	K	L	L	M	K	I	F	R	Y	S	D	V	G	L	V	T	P	L	R	D	G	M	N	L	V	A	K	E	Y	V	A	A	Q	D	P	A	N	P	G	V	L	V	L	S	Q	F	A	G	A	A	N	E	L	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																										.	.	.	.	.														.	.	.	.	.	.													.	.	.	.
Template Conservation																																										.	.	.	.	.														.	.	.	.	.	.
Template Sequence		E	X	V	Q	P	V	V	E	Q	X	E	T	K	P	I	V	A	T	G	K	F	Q	L	G	P	L	A	A	A	X	N	R	C	N	L	L	I	T	N	D	.	.	.	.	.	S	G	P	X	H	V	G	I	S	Q	G	V	P	.	.	.	.	.	.	I	V	A	L	Y	G	P	S	N	P	F	F	Y	G	P	Y
Template Known Secondary structure										T		S	S						T	T															S						S	.	.	.	.	.	S									T	T			.	.	.	.	.	.							S	S						S
Template Predicted Secondary structure																																										.	.	.	.	.														.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.	.							280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
			396	.	.	.	400	.																						.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	T	S	A	L	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	Y	D	R	D	E	V	A	A	A	L	D	R	A	L	T	M	S
Query Conservation		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	H	A	I	V	L	E	T	X	D	S	Y	E	S	X	K	K	I	I	K	E	G	N	Y	K	G	L	S	V	I	S	E	E	Q	V	I	K	A	A	E	T	L	L	L	E	S
Template Known Secondary structure		S	S	S						S		S											T					T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions