Job Description P31677 Confidence 99.96% Date Thu Jan 5 11:48:33 GMT 2012 Rank 20 Aligned Residues 263 % Identity 14% Template c3rhzB_ PDB info PDB header:transferase Chain: B: PDB Molecule:nucleotide sugar synthetase-like protein; PDBTitle: structure and functional analysis of a new subfamily of2 glycosyltransferases required for glycosylation of serine-rich3 streptococcal adhesions Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		L	R	V	N	A	L	L	A	D	K	L	L	P	L	L	Q	D	D	D	I	I	W	I	H	.	.	.	.	D	Y	H	L	L	P	F	A	H	E	L	R	K	R	G	V	N	N	R	I	G	F	F	L	H	I	P	F	P	T	P	E	I	F	N	A	L	P	T	Y	D	T	L	L	E	Q	L	C	D	Y	D	L
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.																														.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		E	S	E	L	S	K	R	L	D	G	I	V	A	G	L	R	H	G	D	V	V	I	F	Q	T	P	T	W	N	T	T	E	F	D	E	K	L	M	N	K	L	K	L	Y	D	I	K	I	V	L	F	I	H	D	V	V	P	.	.	.	.	L	M	N	F	Y	L	M	D	R	T	I	A	Y	Y	N	K	A	D	V
Template Known Secondary structure													T	T	T			T	T										S	S													T	T	S	S								S			G	G	.	.	.	.	G			G	G	G									T	T		S
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	F	Q	T	E	N	D	R	L	A	F	L	D	C	L	S	N	L	T	R	V	T	T	R	S	A	K	S	H	T	A	W	G	K	A	F	R	T	E	V	Y	P	I	G	I	E	P	K	E	I	A	K	Q	A	A	G	P	L	P	P	K	L	A	Q	L	K	A	E	L	K	N	V	Q	N	I	F	S	V	E
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	A	P	S	Q	K	M	I	D	K	L	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	M	N	V	S	K	T	V	V	Q	G	M	W	D	H	P	T	Q	A	P	M	F	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	R	E	I	H	F	P	G
Template Known Secondary structure					S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				S							S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140																		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																.	.	.	.	170	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	D	Y	S	K	G	L	P	E	R	F	L	A	Y	E	A	L	L	E	K	Y	P	Q	H	H	G	K	I	R	Y	T	Q	I	A	P	T	S	R	G	D	V	Q	A	Y	Q	D	I	R	H	Q	L	E	N	E	A	G	R	I	N	G	K	Y	G	Q	L	G	W	T	P	L	Y	Y	L	N	Q	H	F	D	R
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	E	R	F	S	F	V	K	E	W	K	Y	D	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	V	Y	T	W	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	L	P	Q	N	V	H	K	I	N	Y	R	P	D
Template Known Secondary structure			T	T	T		G	G	G	G	G				S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.						S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.															.	.	.	.	.	.	.	.																												200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.								360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.				.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.																																					.	.	.
Query SS confidence																			.	.	.	.	.	.	.																																					.	.	.
Query Sequence		K	L	L	M	K	I	F	R	Y	S	D	V	G	L	V	T	P	.	.	.	.	.	.	.	L	R	D	G	M	N	L	V	A	K	E	Y	V	A	A	Q	D	P	A	N	P	G	V	L	V	L	S	Q	F	A	G	A	A	N	E	L	.	.	.	T	S	A	L	I	V	N	P	Y	D	R	D	E	V	A	A	A
Query Conservation																			.	.	.	.	.	.	.																																					.	.	.
Alig confidence																			.	.	.	.	.	.	.																			.	.	.	.	.														.	.	.								.	.
Template Conservation																																												.	.	.	.	.																								.	.
Template Sequence		E	Q	L	L	M	E	M	S	Q	G	G	F	G	L	V	W	M	D	D	K	D	K	E	Y	Q	S	L	Y	C	S	Y	K	L	G	S	F	L	A	A	G	I	P	.	.	.	.	.	V	I	V	Q	E	G	I	A	N	Q	E	L	I	E	N	N	G	L	G	W	I	V	K	.	.	D	V	E	E	A	I	M	K
Template Known Secondary structure									T	T	S	S								G	G	G					T	T	S												T			.	.	.	.	.					T	T		T	T							T	T						S	.	.	S
Template Predicted Secondary structure																																												.	.	.	.	.																								.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		L	D	R	A	L	T	M	S	L	A	E	R	I	S	R	H	A	E	M	L	D	V	I	V	K	N	D	I	N	H	W	Q	E	C	F	I	.	S	D	L	K	Q	I	V	P
Query Conservation																																						.
Alig confidence					.	.	.																															.
Template Conservation					.	.	.
Template Sequence		V	K	N	.	.	.	V	N	E	D	E	Y	I	E	L	V	K	N	V	R	S	F	N	P	I	L	R	K	G	F	F	T	R	R	L	L	T	E	S	V	F	Q	A	I	C
Template Known Secondary structure					.	.	.																	T					T	T
Template Predicted Secondary structure					.	.	.
Template SS confidence
		288	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions