Job Description P31677 Confidence 98.53% Date Thu Jan 5 11:48:33 GMT 2012 Rank 45 Aligned Residues 172 % Identity 15% Template c3q3hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hmw1c-like glycosyltransferase; PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc Resolution 2.25 Å

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		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	Q	N	I	F	S	V	E	R	L	D	Y	S	K	G	L	P	E	R	F	L	A	Y	E	A	L	L	E	K	Y	P	Q	H	H	G	K	I	R	Y	T	Q	I	A	P	T	S	R	G	D	V	Q	A	Y	Q	D	I	R	H	Q	L	E	N	E	A	G	R	I	N	G	K	Y	G	Q	L	G	W	T	P	L
Query Conservation
Alig confidence																																					.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	E	V	V	N	I	G	I	A	S	T	T	M	K	L	N	P	Y	F	L	E	A	L	K	A	I	R	D	R	A	K	V	K	V	.	.	.	.	H	F	H	F	A	L	G	Q	S	N	G	I	T	H	P	Y	V	E	R	F	I	K	S	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	S
Template Known Secondary structure				S										S	T	T																	S	S			.	.	.	.								T			T	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																					.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.					.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.														.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.																390	.	.	.		.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query Sequence		Y	Y	L	N	Q	H	F	D	R	K	L	L	M	K	I	F	R	Y	S	D	V	G	L	V	T	P	L	R	D	G	M	N	L	V	A	K	E	Y	V	A	A	Q	D	P	A	N	P	G	V	L	V	L	S	Q	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	A	N	.	E	L	T	S
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Alig confidence																															.															.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation																															.															.	.	.	.	.	.
Template Sequence		A	T	A	H	P	H	S	P	Y	H	Q	Y	L	R	I	L	H	N	C	D	M	M	V	N	P	F	P	F	G	.	N	T	N	G	I	I	D	M	V	T	L	G	L	V	.	.	.	.	.	.	G	V	C	K	T	G	A	E	V	H	E	H	I	D	E	G	L	F	K	R	L	G	L	P	E	W	L	I	A	N
Template Known Secondary structure																			T		S						S	S	S		.		S									T	T			.	.	.	.	.	.							S	S													T	T			G	G	G			S
Template Predicted Secondary structure																															.															.	.	.	.	.	.
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.		.	520	.	.	.	.	.	.	.	.	.	530	.	.							.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.				.	.			440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.			.	.
Query SS confidence																																										.	.	.			.	.
Query Sequence		A	L	I	V	N	P	Y	D	R	D	E	V	A	A	A	L	D	R	A	L	T	M	S	L	A	E	R	I	S	R	H	A	E	M	L	D	V	I	V	K	.	.	.	N	D	.	.	I	N	H	W	Q	E	C	F	I	S	D	L	K	Q	I	V	P	R
Query Conservation																																										.	.	.			.	.
Alig confidence		.	.	.	.	.	.	.												.																						.	.	.			.	.
Template Conservation		.	.	.	.	.	.	.												.
Template Sequence		.	.	.	.	.	.	.	T	V	D	E	Y	V	E	R	A	V	R	.	L	A	E	N	H	Q	E	R	L	E	L	R	R	Y	I	I	E	N	N	G	L	N	T	L	F	T	G	D	P	R	P	M	G	Q	V	F	L	E	K	L	N	A	F	L	K	E
Template Known Secondary structure		.	.	.	.	.	.	.	S											.																		S		T							S			T
Template Predicted Secondary structure		.	.	.	.	.	.	.												.
Template SS confidence
									563	.	.	.	.	.	.	570	.	.	.		.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions