Job Description P31677 Confidence 87.39% Date Thu Jan 5 11:48:33 GMT 2012 Rank 58 Aligned Residues 229 % Identity 14% Template c3l7mC_ PDB info PDB header:structural protein Chain: C: PDB Molecule:teichoic acid biosynthesis protein f; PDBTitle: structure of the wall teichoic acid polymerase tagf, h548a Resolution 2.85 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	D	T	L	L	E	Q	L	C	D	Y	D	L	L	G	F	Q	T	E	N	D	R	L	A	F	L	D	C	L	S	N	L	T	R	V	T	T	R	S	A	K	S	H	T	A	W	G	K	A	F	R	T	E	V	Y	P	I	G	I	E	P	K	E	I	A	K	Q	A	A	G	P	L	P	P	K	L	A	Q	L
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	R	N	F	N	R	E	T	S	R	W	D	Y	L	I	S	P	N	R	Y	S	T	E	I	F	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	W	M	D	E	E	R	I	L	E	I	G	Y	P	R	N	D	V	L	V	N	R	A	N	D	Q	E	Y	L	D	E	I	R	T	H
Template Known Secondary structure											T	T		S					S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T			G	G	G				S			G	G	G						S	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.																	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.										270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.
Query Sequence		K	A	E	L	K	N	V	Q	N	I	F	S	V	E	R	L	D	Y	S	K	G	.	.	.	.	.	.	.	.	.	L	P	E	R	F	L	A	Y	E	A	L	L	E	K	Y	P	Q	H	H	G	K	I	R	Y	T	Q	I	A	P	T	S	R	G	D	V	Q	A	Y	Q	D	I	R	H	Q	L	E	N	E	A	G
Query Conservation																							.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	L	P	S	D	K	K	V	I	M	Y	A	P	T	W	R	D	D	E	F	V	S	K	G	K	Y	L	F	E	L	K	I	D	L	D	N	L	Y	K	E	L	G	D	D	.	.	.	.	.	.	.	.	Y	V	I	L	L	R	M	A	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T			S	S												G	G	G			G	G	G	S	S					T	T										T	T	T	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.									.	.	.	580	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.										.	390
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.
Query Sequence		R	I	N	G	K	Y	G	Q	L	G	W	T	P	L	Y	Y	L	N	Q	H	F	D	R	K	L	L	M	K	I	F	R	Y	S	D	V	G	L	V	T	P	L	R	D	G	M	N	L	V	A	K	E	Y	V	A	A	Q	D	P	A	N	P	G	V	L	V	L	S	Q	F	.	.	.	.	.	.	.	.	.	A	G
Query Conservation																																																																							.	.	.	.	.	.	.	.	.
Alig confidence		.																			.	.																			.	.	.	.	.															.	.	.	.	.							.	.	.	.	.	.	.	.	.
Template Conservation		.																			.	.																			.	.	.	.	.															.	.	.	.	.
Template Sequence		.	I	S	N	A	L	D	L	S	G	Y	E	N	F	A	I	D	V	S	.	.	N	Y	N	D	V	S	E	L	F	L	I	S	D	C	L	I	T	D	.	.	.	.	.	Y	S	S	V	M	F	D	Y	G	I	L	K	R	P	.	.	.	.	.	Q	F	F	F	A	Y	D	I	D	K	Y	D	K	G	L	R	G
Template Known Secondary structure		.			T	T				T	T		T	T	T					T	.	.	T		S								T		S					S	.	.	.	.	.	S		T	T					G	G	G	T			.	.	.	.	.						T	T	T	T	T	T	T	T	T			S
Template Predicted Secondary structure		.																			.	.																			.	.	.	.	.															.	.	.	.	.
Template SS confidence
			587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.			.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.						.	.	.	.	.	.	.	630	.	.	.	.	.	.						.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
		391	.	.	.	.	.	.				.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.				.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure									.	.	.																																									.	.	.
Query SS confidence									.	.	.																																									.	.	.
Query Sequence		A	A	N	E	L	T	S	.	.	.	A	L	I	V	N	P	Y	D	R	D	E	V	A	A	A	L	D	R	A	L	T	M	S	L	A	E	R	I	S	R	H	A	E	M	L	D	V	I	V	K	.	.	.	N	D	I	N	H	W	Q	E	C	F	I	S	D	L	K	Q
Query Conservation									.	.	.																																									.	.	.
Alig confidence									.	.	.						.	.																																		.	.	.
Template Conservation																	.	.
Template Sequence		F	Y	M	N	Y	M	E	D	L	P	G	P	I	Y	T	.	.	E	P	Y	G	L	A	K	E	L	K	N	L	D	K	V	Q	Q	Q	Y	Q	E	K	I	D	A	F	Y	D	R	F	C	S	V	D	N	G	K	A	S	Q	Y	I	G	D	L	I	H	K	D	I	K	E
Template Known Secondary structure		B	S	S		T	T	T	S	S	S	S				S	.	.	S	S																													T	T	T			S
Template Predicted Secondary structure																	.	.
Template SS confidence
		654	.	.	.	.	.	660	.	.	.	.	.	.	.	.			.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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