Job Description P31677 Confidence 100.00% Date Thu Jan 5 11:48:33 GMT 2012 Rank 7 Aligned Residues 369 % Identity 16% Template c2x6rA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:trehalose-synthase tret; PDBTitle: crystal structure of trehalose synthase tret from p.2 horikoshi produced by soaking in trehalose Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	L	V	V	V	S	N	R	I	A	P	P	D	E	H	A	A	S	A	G	G	L	A	V	G	I	L	G	A	L	K	A	A	G	G	L	W	F	G	W	S	G	E	T	G	N	E	D	Q	P	L	K	K	V	K	K	G	N	I	T	W	A	S	F	N	L	S	E	Q	D	L	D	E	Y	Y	N	Q	F	S
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	F	V	H	V	N	S	T	.	.	.	.	.	.	.	.	S	F	G	G	G	V	A	E	I	L	H	S	L	V	P	L	L	R	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	E	A	R	W	F	V	I	E	G	P	T	E	F	F	N	V	T	K	T	F
Template Known Secondary structure									S		.	.	.	.	.	.	.	.	S	S	S	S	T														T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.																						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	V	L	W	P	A	F	H	Y	R	L	D	L	V	Q	F	Q	R	P	A	W	D	G	Y	L	R	V	N	A	L	L	A	D	K	L	L	P	L	L	Q	D	D	D	I	I	W	I	H	D	Y	H	L	L	P	F	A	H	E	L	R	K	R	G	V	N	N	R	I	G	F	F	L	H	I	P	F	P	T	P
Query Conservation
Alig confidence							.	.	.	.	.																														.	.																					.	.	.																.
Template Conservation							.	.	.	.	.																														.	.																					.	.	.																.
Template Sequence		H	N	A	L	Q	.	.	.	.	.	G	N	E	S	L	K	L	T	E	E	M	K	E	L	Y	L	N	V	N	R	E	N	S	K	F	I	D	L	S	.	.	S	F	D	Y	V	L	V	H	D	P	Q	P	A	A	L	I	E	F	Y	E	.	.	.	K	K	S	P	W	L	W	R	C	H	I	D	L	S	S	.
Template Known Secondary structure							.	.	.	.	.	T		S	S																			T	T	S	S		G	G	.	.	G	S	S						S	S	T	T	G	G	G	G	G	G	S		.	.	.			S								S			S	S	.
Template Predicted Secondary structure							.	.	.	.	.																														.	.																					.	.	.																.
Template SS confidence
		92	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	I	F	N	A	L	P	T	Y	D	T	L	L	E	Q	L	C	D	Y	D	L	L	G	F	Q	T	E	N	D	R	L	A	F	L	D	C	L	S	N	L	T	R	V	T	T	R	S	A	K	S	H	T	A	W	G	K	A	F	R	T	E	V	Y	P	I	G	I	E	P	K	E	I	A	K	Q	A	A	G	P	.
Query Conservation																																																																																	.
Alig confidence		.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation		.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	P	N	R	E	F	W	E	F	L	R	R	F	V	E	K	Y	D	R	Y	I	F	H	L	P	E	Y	V	Q	P	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	N	K	A	V	I	M	P	P	S	I	D	P	L	S	E	K	N	V	E	L	K	Q	T
Template Known Secondary structure		.	.	.														T	T	S	S					S	S	G	G	G	S		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T								B		T	T	S	T	T	T	S
Template Predicted Secondary structure		.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	P	K	L	A	Q	L	K	A	E	L	K	N	V	Q	N	I	F	S	V	E	R	L	D	Y	S	K	G	L	P	E	R	F	L	A	Y	E	A	L	L	E	K	Y	P	Q	H	H	G	K	I	R	Y	T	Q	I	A	P	T	S	R	G	D	V	Q	A	Y	Q	D	I	R	H	Q	L	E	N	E	A	G	R
Query Conservation
Alig confidence																																																		.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		E	I	L	R	I	L	E	R	F	D	V	D	P	E	K	P	I	I	T	Q	V	S	R	F	D	P	W	K	G	I	F	D	V	I	E	I	Y	R	K	V	K	E	K	I	P	G	V	Q	.	.	.	.	L	L	L	V	G	V	M	A	H	D	D	P	E	G	W	I	Y	F	E	K	T	L	R	K	I	G	E	D
Template Known Secondary structure										T	T			T	T	S										S	T	T	S														T	T		T	T			.	.	.	.									T	T																T	T
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		I	N	G	K	Y	G	Q	L	G	W	T	P	L	Y	Y	L	N	Q	H	F	D	R	K	L	L	M	K	I	F	R	Y	S	D	V	G	L	V	T	P	L	R	D	G	M	N	L	V	A	K	E	Y	V	A	A	Q	D	P	A	N	P	G	V	L	V	L	S	Q	F	A	G	A	A	N	E	L	T	S	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence				.	.	.	.	.	.	.	.																																																.	.	.	.	.																.	.	.
Template Conservation				.	.	.	.	.	.	.	.																																																.	.	.	.	.
Template Sequence		Y	D	.	.	.	.	.	.	.	.	V	K	V	L	T	N	L	I	G	V	H	A	R	E	V	N	A	F	Q	R	A	S	D	V	I	L	Q	M	S	I	R	E	G	F	G	L	T	V	T	E	A	M	W	K	G	K	P	.	.	.	.	.	V	I	G	R	A	V	G	G	I	K	F	Q	I	V	D	G	E	T
Template Known Secondary structure		T	T	.	.	.	.	.	.	.	.						G	G	G	T														S							S	S		S	S										T	T			.	.	.	.	.					S										B	T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																																																.	.	.	.	.
Template SS confidence
		293	.									.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.						.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		A	L	I	V	N	P	Y	D	R	D	E	V	A	A	A	L	D	R	A	L	T	M	S	L	A	E	R	I	S	R	H	A	E	M	L	D	V	I	V	K	.	N	D	I	N	H	W	Q	E	C	F	I	S	D	L	K	Q	I
Query Conservation																																										.
Alig confidence							.	.															.																			.
Template Conservation							.	.															.
Template Sequence		G	F	L	V	R	.	.	D	A	N	E	A	V	E	V	V	L	Y	L	L	K	.	H	P	E	V	S	K	E	M	G	A	K	A	K	E	R	V	R	K	N	F	I	I	T	K	H	M	E	R	Y	L	D	I	L	N	S	L
Template Known Secondary structure						S	.	.	S														.																				T	B														T
Template Predicted Secondary structure							.	.															.
Template SS confidence
		360	.	.	.	.			.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.