Job Description P31677 Confidence 99.89% Date Thu Jan 5 11:48:33 GMT 2012 Rank 30 Aligned Residues 205 % Identity 15% Template c2vsnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:xcogt; PDBTitle: structure and topological arrangement of an o-glcnac2 transferase homolog: insight into molecular control of3 intracellular glycosylation Resolution 2.75 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	E	V	Y	P	I	G	I	E	P	K	E	I	A	K	Q	A	A	G	P	L	P	P	K	L	A	Q	L	K	A	E	L	K	N	V	Q	N	I	F	S	V	E	R	L	D	Y	S	K	G	L	P	E	R	F	L	A	Y	E	A	L	L	E	K	Y	P	Q	H	H	G	K	I	R	Y	T	Q	I	A	P	T
Query Conservation
Alig confidence																										.	.	.																			.	.																							.	.	.	.
Template Conservation																										.	.	.																			.	.																							.	.	.	.
Template Sequence		H	V	L	R	L	Q	G	A	F	Q	P	S	D	T	S	R	V	V	A	E	P	P	S	R	.	.	.	T	Q	C	G	L	P	E	Q	G	V	V	L	C	C	F	N	N	S	.	.	Y	K	L	N	P	Q	S	M	A	R	M	L	A	V	L	R	E	V	P	D	S	V	.	.	.	.	L	W	L	L	S	G	P
Template Known Secondary structure							S	S		S					T	T									T	.	.	.	G	G	G	T			S	S	S									G	.	.	G	G																S	T	T			.	.	.	.							S
Template Predicted Secondary structure																										.	.	.																			.	.																							.	.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.			.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.					.	410	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		S	R	G	D	V	Q	A	Y	Q	D	I	R	H	Q	L	E	N	E	A	G	R	I	N	G	K	Y	G	Q	L	G	W	T	.	P	L	Y	Y	L	N	Q	H	F	D	R	K	L	L	M	K	I	F	R	Y	S	D	V	G	L	V	T	P	L	R	D	G	M	N	L	V	A	K	E	Y	V	A	A	Q	D	P	A
Query Conservation																																		.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																																	.														.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.														.
Template Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	D	A	R	L	R	A	F	A	H	A	Q	G	V	D	A	Q	R	L	V	F	M	P	K	L	P	H	P	Q	Y	L	A	R	Y	R	H	A	D	L	F	L	D	T	H	P	Y	N	A	.	H	T	T	A	S	D	A	L	W	T	G	C	P	.
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T												T	T	S		G	G	G																G	G	G		S						S	S	S			.	S										T			.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.														.
Template SS confidence
		416																.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.		.	.	.	.	470	.	.	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.										.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.				.	.	440	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																																											.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.																																											.	.	.
Query Sequence		N	P	G	V	L	V	L	S	Q	F	A	G	A	A	N	E	L	.	.	.	.	.	.	.	.	.	T	S	A	L	I	V	N	P	Y	D	R	D	E	V	A	A	A	L	D	R	A	L	T	M	S	L	A	E	R	I	S	R	H	A	E	M	L	D	V	I	V	K	.	.	.	N	D	I	N	H	W	Q	E	C
Query Conservation																			.	.	.	.	.	.	.	.	.																																											.	.	.
Alig confidence		.	.	.	.														.	.	.	.	.	.	.	.	.								.	.															.																			.	.	.
Template Conservation		.	.	.	.																														.	.															.
Template Sequence		.	.	.	.	V	L	T	T	P	G	E	T	F	A	A	R	V	A	G	S	L	N	H	H	L	G	L	D	E	M	N	V	A	.	.	D	D	A	A	F	V	A	K	A	V	A	L	A	S	.	D	P	A	A	L	T	A	L	H	A	R	V	D	V	L	R	R	A	S	G	V	F	H	M	D	G	F	A	D	D
Template Known Secondary structure		.	.	.	.			B				S	S	G	G	G	S										T		G	G	G	B		S	.	.	S														.																			S	G	G	G
Template Predicted Secondary structure		.	.	.	.																														.	.															.
Template SS confidence
						479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.			.	.	510	.	.	.	.	.	.	.	.	.	520	.		.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		447	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	S	D	L	K	Q	I	V	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	A	L	L	Q	A	L	A	R	R
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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