 |
Job Description | P31677 | Confidence | 20.23% | Date | Thu Jan 5 11:48:33 GMT 2012 |
Rank | 84 | Aligned Residues | 86 |
% Identity | 14% | Template | c2oemA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:2,3-diketo-5-methylthiopentyl-1-phosphate enolase; |
PDBTitle: crystal structure of a rubisco-like protein from geobacillus2 kaustophilus liganded with mg2+ and 2,3-diketohexane 1-phosphate
|
Resolution | 1.70 Å |
|
 |
  |   |
349 | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 400 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
F | R | Y | S | D | V | G | L | V | T | P | L | R | D | G | M | N | L | V | A | K | E | Y | V | A | A | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | P | A | N | P | G | V | L | V | L | S | Q | F | A | G | A | A | N | E | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | S | A | L | I | V | N | P |
Query Conservation |   |
  |   |   |
|
|
|   |
|   |
|
|   |   |
|   |   |
|
|   |   |   |
|
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   | . | . | . | . |   |   |
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|
|
|   |
|
|
|
Template Sequence |   |
L | A | G | A | D | F | V | L | F | P | S | P | Y | G | S | V | A | L | E | R | E | Q | A | L | G | I | A | R | A | L | T | D | D | Q | E | P | F | A | R | A | F | P | V | P | S | A | G | I | . |
. |
. |
. |
H | P | G | L | V | P | L | I | I | R | D | F | G | L | D | T | I | V | N | A | G | G | G | I | H | G | H | P |
Template Known Secondary structure |   |
 |  | T |
| S |  |  |  |  |  |
| S | S | S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S | S | S |
|
|
|  |  |  |  |  | S | S |
| . | . | . | . |
| G | G | G |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  | S |  |  |  |  | T | S | T |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | |
|
|
|
. | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . |
  |
  |   |
404 | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | D | R | D | E | V | A | A | A | L | D | R | A | L | T | . |
. |
. |
. |
. |
M | S | L | A | E | R | I | S | R | H | A | E | M | L | D | V | I | V | K | N |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|   |   |   |
|   | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |   |
|   |
|
|
|   |
|
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |   |
|
|   |   |
|
|   |   |
|
Template Sequence |   |
D | G | A | I | G | G | G | R | A | F | R | A | A | I | D | A | V | L | A | G | R | P | L | R | A | A | A | A | E | N | E | A | L | Q | K | A | I | D | R | W |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
367 | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|