Return to main results Retrieve Phyre Job Id

Job DescriptionP31677
Confidence31.19%DateThu Jan 5 11:48:33 GMT 2012
Rank72Aligned Residues93
% Identity19%Templatec1wwkA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:phosphoglycerate dehydrogenase; PDBTitle: crystal structure of phosphoglycerate dehydrogenase from pyrococcus2 horikoshii ot3
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   292.......300.........310.........320.........330.........340... ......350....... ..
Predicted Secondary structure 
















..........

..

Query SS confidence 



















































. . . . . . . . . .













. .

Query Sequence  RYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRK. . . . . . . . . . LLMKIFRYSDVGLV. . TP
Query Conservation   

 

                       
            
   
     ..........

      


 
 ..

Alig confidence 








................













.











..........













..

Template Conservation   




 
 ................

  

  
  

 . 
    
                
 

   



   


Template Sequence  TIGIIGFGR. . . . . . . . . . . . . . . . IGYQVAKIANALGM. NILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPL
Template Known Secondary structure 

S................TT
.
SS

TT



S



Template Predicted Secondary structure 



................


.

















Template SS confidence 















































































   141........ 150.........160... ......170.........180.........190.........200...
 
   360.........370.........380.........390.........400.........410.....
Predicted Secondary structure 

























Query SS confidence 























































Query Sequence  LRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDR
Query Conservation    
  

   



 
 
     

 
   
       
  
 
     

 

  
Alig confidence 

















...




..







.........










Template Conservation 
  
  

    
  

 ...

 

..
  

  
.........
  

  

  
Template Sequence  VESTYHLINEERLKLMKK. . . TAILI. . NTSRGPVV. . . . . . . . . DTNALVKALKE
Template Known Secondary structure  STTTTT
B
S
T...T
..
S
GGGB.........
Template Predicted Secondary structure 











...
..






.........

Template SS confidence 























































   204.....210.........220. ..... ...230.... .....240.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions