Job Description P31677 Confidence 19.58% Date Thu Jan 5 11:48:33 GMT 2012 Rank 86 Aligned Residues 93 % Identity 15% Template c1gdhA_ PDB info PDB header:oxidoreductase(choh (d)-nad(p)+ (a)) Chain: A: PDB Molecule:d-glycerate dehydrogenase; PDBTitle: crystal structure of a nad-dependent d-glycerate2 dehydrogenase at 2.4 angstroms resolution Resolution 2.40 Å

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		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.													.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		R	Y	T	Q	I	A	P	T	S	R	G	D	V	Q	A	Y	Q	D	I	R	H	Q	L	E	N	E	A	G	R	I	N	G	K	Y	G	Q	L	G	W	T	P	L	Y	Y	L	N	Q	H	F	D	R	.	.	.	.	.	.	.	.	.	.	.	.	K	L	L	M	K	I	F	R	Y	S	D	V	G	L	V	.	.
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		T	L	G	I	Y	G	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	G	Q	A	L	A	K	R	A	Q	G	F	D	M	.	D	I	D	Y	F	D	T	H	R	A	S	S	S	D	E	A	S	Y	Q	A	T	F	H	D	S	L	D	S	L	L	S	V	S	Q	F	F	S	L	N	A
Template Known Secondary structure									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	T		.							S	S											T					S	S									S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		149	150	.	.	.	.	.	.																	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	L	R	D	G	M	N	L	V	A	K	E	Y	V	A	A	Q	D	P	A	N	P	G	V	L	V	L	S	Q	F	A	G	A	A	N	E	L	T	S	A	L	I	V	N	P	Y	D	R	D	E	V	A	A	A	L	D	R
Query Conservation
Alig confidence																						.	.	.						.	.									.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.						.	.									.	.	.	.	.	.	.	.	.
Template Sequence		P	S	T	P	E	T	R	Y	F	F	N	K	A	T	I	K	S	L	P	Q	.	.	.	G	A	I	V	V	.	.	N	T	A	R	G	D	L	V	.	.	.	.	.	.	.	.	.	D	N	E	L	V	V	A	A	L	E	A
Template Known Secondary structure					T	T	T	T	T		B	S					T	T	S		T	.	.	.	T					.	.			S		G	G	G	B	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.						.	.									.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.			.	.	.	240	.	.	.	.										.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions