Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACY6
Confidence2.07%DateThu Jan 5 11:19:26 GMT 2012
Rank32Aligned Residues7
% Identity43%Templatec3mlrP_
PDB info PDB header:immune systemChain: P: PDB Molecule:hiv-1 gp120 third variable region (v3) crown; PDBTitle: crystal structure of anti-hiv-1 v3 fab 2557 in complex with a ny5 v32 peptide
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130....
Predicted Secondary structure 




Query SS confidence 






Query Sequence  RGVPVGP
Query Conservation   





Alig confidence 






Template Conservation 






Template Sequence  KGIAIGP
Template Predicted Secondary structure 



Template SS confidence 






   305....310.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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