Return to main results Retrieve Phyre Job Id

Job DescriptionP24252
Confidence61.60%DateThu Jan 5 11:41:38 GMT 2012
Rank1Aligned Residues43
% Identity5%Templatec2ld7B_
PDB info PDB header:transcriptionChain: B: PDB Molecule:paired amphipathic helix protein sin3a; PDBTitle: solution structure of the msin3a pah3-sap30 sid complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103.... ..110.........120.........130.........140.....
Predicted Secondary structure 
.







Query SS confidence 




.





































Query Sequence  FRPHI. DSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPD
Query Conservation 

  
.
  

  
  

  

 
 


  

 

     

  
Alig confidence 




.





































Template Conservation 

  
     
 


  
  
    
   

   
  

   

Template Sequence  VRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE
Template Known Secondary structure 
STT
S
TTT
Template Predicted Secondary structure 








Template SS confidence 











































   471........480.........490.........500.........510....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions