Job Description P36767 Confidence 9.40% Date Thu Jan 5 11:53:50 GMT 2012 Rank 36 Aligned Residues 46 % Identity 24% Template c2d3o1_ PDB info PDB header:ribosome Chain: 1: PDB Molecule:trigger factor; PDBTitle: structure of ribosome binding domain of the trigger factor2 on the 50s ribosomal subunit from d. radiodurans Resolution 3.35 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.		.	.			.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																						.	.	.			.			.	.						.	.	.	.	.	.
Query SS confidence																						.	.	.			.			.	.						.	.	.	.	.	.
Query Sequence		L	P	S	P	V	I	K	Q	A	L	E	A	K	I	A	K	L	E	A	E	.	.	.	Q	A	.	R	K	.	.	L	K	K	T	E	.	.	.	.	.	.	K	D	S	L	K	D	E	V	L	H	S	L	L	P	R	A	F
Query Conservation																						.	.	.			.			.	.						.	.	.	.	.	.
Alig confidence																						.	.	.			.			.	.						.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	A	A	E	V	N	R	A	Y	D	Q	V	W	A	G	L	A	R	D	V	R	V	P	G	F	R	P	G	K	A	P	R	K	V	I	E	N	R	V	G	K	G	Y	V	E	S	Q	V	R	D	R	L	L	E	T	H	Y
Template Known Secondary structure				G	G	G	T													T	T	S		B	T	T	B		T	T				S	T	T					T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions