Job Description P36767 Confidence 6.07% Date Thu Jan 5 11:53:50 GMT 2012 Rank 66 Aligned Residues 92 % Identity 12% Template c1k8wA_ PDB info PDB header:lyase/rna Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: crystal structure of the e. coli pseudouridine synthase2 trub bound to a t stem-loop rna Resolution 1.85 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.							.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																	.	.	.	.	.	.									.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.									.	.	.	.	.
Query Sequence		N	G	L	I	M	V	D	C	A	S	A	K	K	A	E	D	T	L	A	L	L	R	K	S	L	G	S	L	P	V	V	.	.	.	.	.	.	P	L	S	M	E	N	P	I	.	.	.	.	.	E	L	T	L	T	E	W	V	R	S	G	S	A	A	Q	G	F	Q	L	L	D	E	A	E	L	K	S	L	L	E
Query Conservation																																	.	.	.	.	.	.									.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		N	G	V	L	L	L	D	K	P	Q	G	M	S	S	N	D	A	L	Q	K	V	K	R	I	Y	N	A	N	R	A	G	H	T	G	A	L	D	P	L	A	T	G	M	L	P	I	C	L	G	E	A	T	K	F	S	Q	Y	L	L	D	S	D	K	R	Y	R	V	I	A	R	L	G	Q	R	T	D	T	S	D	A
Template Known Secondary structure											T	T														T	T		S					S	S				T	T										G	G	G	G	G	G	T					T	S											T				S	S	S	B	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	G	V	I	R	A	K	K	Q	D	L	T	S	E	E	I	T	N	H	I	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	Q	I	V	E	E	R	P	V	T	F	S	A	E	Q	L	A	A	A	L	D	T
Template Known Secondary structure		T	S																					T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions