Job Description P36767 Confidence 6.48% Date Thu Jan 5 11:53:50 GMT 2012 Rank 60 Aligned Residues 52 % Identity 21% Template c1ex4A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:integrase; PDBTitle: hiv-1 integrase catalytic core and c-terminal domain Resolution 2.80 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	T	M	M	W	I	D	T	V	N	G	L	I	M	V	D	C	A	S	A	K	K	A	E	D	T	L	A	L	L	R	K	S	L	G	S	L	P	V	V	P	L	S	M	E	N	P	I	E	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	I	L	V	A	V	H	V	A	S	G	Y	I	E	A	E	V	I	P	A	E	T	G	Q	E	T	A	Y	F	L	L	K	L	A	G	R	W	P	V	K	T	I	H	T	D	N	G	S	N	F	T
Template Known Secondary structure										T	T	T									S	S	S	S	T	T													S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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