 |
Job Description | P77215 | Confidence | 30.39% | Date | Thu Jan 5 12:26:27 GMT 2012 |
Rank | 310 | Aligned Residues | 101 |
% Identity | 12% | Template | d1vc4a_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Tryptophan biosynthesis enzymes
|
Resolution | 1.80 |
|
 |
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | |
|
|
|
. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | K | L | A | H | A | C | A | P | Y | N | L | K | W | I | E | . |
. |
. |
. |
E | C | L | P | P | Q | Q | Y | E | S | Y | R | E | L | K | R | N | A | P | V | G | M | M | V | T | S | G | E | H | H | G | T | L | Q | S | F | R | T | L | S | E | T | G | I | D | I | M | Q | P | D | V | G | W | C | G | G | L | T | T |
Query Conservation |   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
| . | . | . | . |
|
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|   |
|   |   |   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   |   |
|   |   |
|
|   |   | . | . |
|   |
|
|
|
|   |
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|
|
|
|   |   |   |
|   | . | . |   |   |
Template Sequence |   |
P | V | E | A | A | L | A | Y | A | R | G | G | A | R | A | V | S | V | L | T | E | P | H | R | F | G | G | S | L | L | D | L | K | R | V | R | E | A | . |
. |
V | D | L | P | L | L | R | K | D | F | V | V | D | P | F | M | L | E | E | A | R | A | F | G | A | S | A | A | L | L | I | V | A | L | L | G | . |
. |
E | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
|
| S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |
|
| S |
|  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |  |  | G | . | . | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
. | . |
  |
  |   |
308 | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | E | I | A | A | I | A | K | S | R | G | Q | L | V | V | P | H | G | S | S | V | Y | S | H | H | A | V | I |
Query Conservation |   |
  |   |
|
|
|   |
|
|   |
|   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
T | G | A | Y | L | E | E | A | R | R | L | G | L | E | A | L | V | E | V | H | T | E | R | E | L | E | I | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|