 |
Job Description | P77215 | Confidence | 24.10% | Date | Thu Jan 5 12:26:27 GMT 2012 |
Rank | 335 | Aligned Residues | 92 |
% Identity | 14% | Template | d1q45a_ |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.00 |
|
 |
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | M | V | A | D | M | R | E | K | C | G | E | D | F | W | L | M | L | D | C | W | M | S | Q | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | N | Y | A | T | K | L | A | H | A | C | A | P | Y | N | L | K | W | I | E | E | C | L | P | P | Q | Q | Y | E | S | Y | R | E | L | K | R | N | A | P |
Query Conservation |   |
  |   |   |
|   |
|
|
|
|   |
|
|   |
|   |   |
|   |
|
|
|
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |
|
|
|   |
|
|
|   |   |
|
|   |   |   | . |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   | . |
Template Sequence |   |
K | Q | V | V | E | G | V | V | S | A | I | G | A | S | K | . |
V | G | V | R | V | S | P | A | I | D | H | L | D | A | T | D | S | D | P | L | S | L | G | L | A | V | V | G | M | L | N | K | L | Q | G | V | N | G | S | K | L | A | Y | L | H | V | T | Q | P | R | E | E | E | A | K | L | M | K | S | L | R | M | A | . |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| G | G | G | . |  |  |  |  |  |
| T | T |
|
| G | G | G |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|
| S |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | |
. | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
  |
  |   |
268 | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | |
290 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | M | M | V | T | S | G | E | H | H | G | T | L | Q | S | F | R | T | L | S | E | . |
T | G | I | D | I | M | Q | P |
Query Conservation |   |
  |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   | . |   |
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |   |
|
|
| . |   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |
|
Template Sequence |   |
Y | N | G | T | F | M | S | S | G | G | F | . |
N | K | E | L | G | M | Q | A | V | Q | Q | G | D | A | D | L | V | S | Y |
Template Known Secondary structure |   |
S |
| S |
|  |  |  |  | S | S |
| . |
|  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
313 | . | . | . | . | . | . | 320 | . | . | . | |
. | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|