Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 34 Aligned Residues 327 % Identity 22% Template c3t8qA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 family protein from hoeflea phototrophica Resolution 2.00 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S	.	.	T	A	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L
Query Conservation																			.	.
Alig confidence																			.	.																																								.	.
Template Conservation																																																												.	.
Template Sequence		C	F	V	K	V	T	T	D	S	G	E	T	G	W	G	Q	V	A	P	Y	Y	A	D	I	T	A	Q	V	L	H	R	Q	V	A	P	Y	A	L	G	K	P	A	L	D	I	D	Y	L	V	D	I	I	P	E	K	E	H	K	.	.	F	P	G	S	Y	L	R	R	A	L	G	G	L	D	T	A	L	W	D	L
Template Known Secondary structure									T	T	S									S	S	S												T					T	T	S	B	T	T													T	T	T	.	.			S
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.									.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																														.	.	.	.	.																										.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.																										.	.	.	.	.	.	.	.
Query Sequence		F	G	K	V	V	G	L	P	V	Y	K	L	L	G	G	A	V	R	D	E	I	Q	F	Y	A	T	G	A	.	.	.	.	.	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	.	.	.	.	.	.	.	.	A	G	I	R	K	D	A	A	M	V	A	D	M	R
Query Conservation																														.	.	.	.	.																										.	.	.	.	.	.	.	.
Alig confidence																		.												.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		R	G	R	L	E	G	K	P	V	C	E	L	I	G	G	T	.	P	G	T	V	R	A	Y	G	S	S	M	K	R	D	I	T	P	K	D	E	A	A	R	L	S	R	L	R	D	R	F	G	F	D	A	F	K	F	R	I	G	A	E	C	G	R	G	Q	D	E	W	P	G	R	T	E	E	I	V	P	T	I	R
Template Known Secondary structure							T		B					T	T			.	S												S	S	S																										S		T	T		T	T			S	S	T	T
Template Predicted Secondary structure																		.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y	A	T	K	L	A	H	A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.
Query Conservation																																																																																	.
Alig confidence																																																									.	.																							.
Template Conservation																																																									.	.
Template Sequence		A	A	M	D	D	S	V	A	L	L	V	D	A	N	S	C	Y	G	P	E	Q	A	I	E	V	G	K	M	L	E	Q	N	G	I	S	H	Y	E	E	P	C	P	Y	W	E	Y	E	Q	T	Q	Q	V	T	N	A	.	.	L	S	I	D	V	T	G	G	E	Q	D	C	E	L	Q	N	W	R	R	M	I	E	M
Template Known Secondary structure				S		T	T	S							T	T																	T	T								S		T	T												.	.		S	S						T	T													T
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350					.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E	I	A	A	I	A	K	S	R	G	Q	L	V	V	P	H	G	S	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	.	.	.	.	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L
Query Conservation																																																															.	.	.	.
Alig confidence																																																															.	.	.	.
Template Conservation
Template Sequence		K	A	V	D	I	V	Q	P	D	I	C	Y	L	G	G	I	T	R	T	L	R	V	A	E	M	A	H	K	A	G	L	P	C	T	P	H	A	A	N	L	S	M	V	T	L	F	T	M	H	L	L	R	A	I	P	N	A	G	K	Y	L	E	F	S	I	E	G	E	D	Y	Y	P	W	Q	D	D	L	F	V	A
Template Known Secondary structure		T			S										T	S														T	T			B						S	T	T											T	T		T	T	B		S									T	T	T		G	G	G	T	T		B	S	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L	N	R	D	C	N	L	K	R	P	Y
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		S	P	Y	E	I	V	D	G	K	A	T	.	.	V	T	D	L	P	G	W	G	V	E	V	S	P	T	W	L	E	T	S	A	H
Template Known Secondary structure			S				B	T	T				.	.			S		S	B	T				B							T	S
Template Predicted Secondary structure													.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions