Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 27 Aligned Residues 341 % Identity 26% Template c3rr1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative d-galactonate dehydratase; PDBTitle: crystal structure of enolase prk14017 (target efi-500653) from2 ralstonia pickettii 12j Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		K	I	K	Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S	.	.
Query Conservation																																																																																.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	R	L	T	T	Y	R	L	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	L	K	V	E	T	D	E	G	V	T	G	W	G	E	P	V	I
Template Known Secondary structure												T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.																			.	.																														.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L	L	G	G	A	V	R	D
Query Conservation
Alig confidence																																									.	.
Template Conservation																																									.	.
Template Sequence		E	G	R	A	R	T	V	E	A	A	V	H	E	L	S	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	T	M	Y	R	A	G	F	Y	.	.	R	G	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	G	V	P	V	Y	E	L	L	G	G	L	V	R	D
Template Known Secondary structure		T	T													G	G	G	T	T	T	S		T	T												S	S	S		.	.																										T	S	B					T	T			S		S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		163	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.										.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure									.	.																													.	.	.	.	.	.	.	.	.
Query SS confidence									.	.																													.	.	.	.	.	.	.	.	.
Query Sequence		E	I	Q	F	Y	A	T	.	.	G	A	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	A	.	.	.	.	.	.	.	.	.	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y
Query Conservation									.	.																													.	.	.	.	.	.	.	.	.
Alig confidence									.	.																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	M	R	T	Y	S	W	V	G	G	D	R	P	A	D	V	I	A	G	M	K	A	L	Q	A	G	G	F	D	H	F	K	L	N	G	C	E	E	M	G	I	I	D	T	S	R	A	V	D	A	A	V	A	R	V	A	E	I	R	S	A	F	G	N	T	V	E	F	G	L	D	F	H	G	R	V	S	A	P	M
Template Known Secondary structure												S	S													T	T	T								S	S	S	S	S	S		B		S																	T	T	G	G	G	S							T	T		B
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		A	T	K	L	A	H	A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E
Query Conservation																																																												.
Alig confidence																																				.	.																							.
Template Conservation																																				.	.
Template Sequence		A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	T	Y	A	R	L	A	A	H	.	.	T	H	L	P	I	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	V	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	V	K
Template Known Secondary structure										G	G	G			S						S				S	S	S							T	T	.	.		S	S						T	T			S														S					B	T	T	T	T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	I	A	K	S	R	G	Q	L	V	V	P	H	G	S	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L	N
Query Conservation
Alig confidence																																																.																			.	.
Template Conservation																																																.																			.	.
Template Sequence		I	A	A	M	A	E	A	Y	D	V	A	L	A	P	H	C	P	L	G	P	I	A	L	A	A	C	L	H	V	D	F	V	S	W	N	A	T	L	Q	E	Q	S	M	G	A	E	.	L	L	D	Y	V	R	N	K	A	D	F	A	L	E	G	G	Y	I	.	.	R	P	P	R	L	P	G	L	G	V	D	I	D
Template Known Secondary structure								T	T	T						B			S																T	T	B						S					.	S	G	G	G	B	S		G	G	G	G				T	T			.	.					S	S	B	T				B
Template Predicted Secondary structure																																																.																			.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.	.
		391	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	C	N	L	K	R	P	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	L	V	I	E	R	S	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions