Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 15 Aligned Residues 358 % Identity 21% Template c3n6jA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from actinobacillus succinogenes 130z Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	L	P	K	I	K	Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A
Query Conservation
Alig confidence																								.	.	.	.	.	.						.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.						.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	S	V	P	V	I	T	D	X	K	V	I	P	V	A	G	H	D	S	X	L	X	.	.	.	.	.	.	N	V	G	G	A	.	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	F	T	R	N	I	V	I	L	T	D	N	S	G	H	T	G	V	G
Template Known Secondary structure						B																B		.	.	.	.	.	.		T	T			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												T	T
Template Predicted Secondary structure																								.	.	.	.	.	.						.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.		.	.																									.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.									.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.
Query Sequence		V	S	T	A	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	.	.	.	.	.	.	.	.	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V
Query Conservation																																											.	.	.	.	.	.	.	.
Alig confidence																.																											.	.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		E	A	P	G	G	A	T	I	E	N	A	L	T	E	.	A	I	P	H	V	V	G	R	P	I	S	I	L	N	K	I	V	N	D	X	H	N	G	Y	L	D	A	D	Y	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	X	G	Q	F	L	G	V	P	V
Template Known Secondary structure						S									T	.	T	G	G	G	T	T	T		B	G	G	G																							S			T	T	S	S	T																				T	S	B	G
Template Predicted Secondary structure																.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		153	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.																																.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.		.
Predicted Secondary structure							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.
Query SS confidence							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.
Query Sequence		Y	K	L	L	G	.	G	A	V	R	D	E	I	Q	F	Y	A	T	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	.	P	T	H	W	G	P	H	D	G	D	A	.	G
Query Conservation							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.
Alig confidence							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.
Template Conservation
Template Sequence		A	E	L	L	G	P	G	K	Q	R	D	E	V	T	V	L	G	Y	L	F	Y	V	G	D	D	K	I	T	D	L	P	Y	Q	Q	P	V	T	G	K	H	E	W	Y	D	I	R	R	K	K	A	X	D	T	Q	A	V	I	E	L	A	A	A	S	K	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	F	E
Template Known Secondary structure		G	G	T	S	T	T					S				B							B			G	G	G	S		S								S	S							T	T	S		B		S																		S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.					.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y	A	T	K	L	A	H	A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	.	.	.	.	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S
Query Conservation																																																											.	.	.	.
Alig confidence																.																														.													.	.	.	.											.	.
Template Conservation																.																														.																											.	.
Template Sequence		G	S	K	E	I	D	T	V	I	E	L	K	K	H	.	F	P	D	A	R	I	T	L	D	P	N	G	C	W	S	L	D	E	A	I	Q	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	I	G	E	N	G	Y	S	G	R	E	I	X	A	E	F	R	R	R	.	.	T	G	I	P	T	A	T
Template Known Secondary structure																.		S	S	S							T	T	B	B										T	T		T	T	T	.		S				S		B			B	T	T	B													.	.
Template Predicted Secondary structure																.																														.																											.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																	.																																					.
Query SS confidence																	.																																					.
Query Sequence		G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E	I	A	A	I	A	K	S	R	G	Q	L	V	V	P	H	.	G	S	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D
Query Conservation																	.																																					.
Alig confidence																	.											.																										.
Template Conservation																												.
Template Sequence		N	X	I	A	T	N	W	R	E	X	C	H	A	I	X	L	Q	S	V	D	I	P	L	A	D	P	.	H	F	W	T	L	T	G	A	S	R	V	A	Q	L	C	N	E	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	X	F	S	H	V	G	A	A	A	P	G	N	P	T	A	L	D	T
Template Known Secondary structure		S	S	S			S											T			S			B				.																			T				B					S															T			S					B
Template Predicted Secondary structure																												.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L	N	R	D	C	N	L	K	R
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		H	W	I	W	Q	E	G	D	F	Y	L	T	K	N	P	L	E	I	K	D	G	K	I	K	.	.	L	N	D	K	P	G	L	G	I	E	L	N	X	D	N	V	L	K	A
Template Known Secondary structure							T	T	T			S	B	S	S						T	T				.	.			S		S	B	T				B
Template Predicted Secondary structure																										.	.
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.