Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 45 Aligned Residues 343 % Identity 20% Template c3my9A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of a muconate cycloisomerase from azorhizobium2 caulinodans Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		K	I	K	Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S	.	.
Query Conservation																																																																																.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	E	R	I	R	I	F	L	V	E	S	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	G	S	V	K	R	V	L	L	E	V	T	S	A	D	G	I	V	G	W	G	E	A	A	P
Template Known Secondary structure		B														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.																																									20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L	L	G	G	A	V	R	D
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		W	T	P	E	A	A	F	S	A	L	D	I	Y	L	R	P	L	I	L	G	A	P	I	K	R	V	R	E	L	M	A	R	M	D	K	M	L	V	G	H	G	.	.	.	.	.	.	.	E	A	K	A	A	V	E	M	A	L	L	D	I	L	G	K	A	T	G	L	S	V	A	D	L	L	G	G	R	V	R	D
Template Known Secondary structure													T	T	T					T	T		B	T	T													S		S			.	.	.	.	.	.	.																			T		B	T	T	G	G	G	T			S		S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.								.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.																										.
Query SS confidence										.	.																										.
Query Sequence		E	I	Q	F	Y	A	T	G	.	.	A	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	.	D	A	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y	A	T	K	L	A	H	A	C
Query Conservation										.	.																										.
Alig confidence										.	.																										.
Template Conservation
Template Sequence		R	I	P	L	S	F	S	I	A	D	P	D	F	D	A	D	L	E	R	M	R	A	M	V	P	A	G	H	T	V	F	K	M	K	T	G	V	K	P	H	A	E	E	L	R	I	L	E	T	M	R	G	E	F	G	E	R	I	D	L	R	L	D	F	N	Q	A	L	T	P	F	G	A	M	K	I	L	R	D	V
Template Known Secondary structure					B							S	S												T	T	T	T									S	S	S																	G	G	G	S							T	T				T	T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E	I	A	A	I	A	K	S	R
Query Conservation																																																				.
Alig confidence																												.	.																							.
Template Conservation																												.	.
Template Sequence		D	A	F	R	P	T	F	I	E	Q	P	V	P	R	R	H	L	D	A	M	A	G	F	A	A	A	.	.	L	D	T	P	I	L	A	D	E	S	C	F	D	A	V	D	L	M	E	V	V	R	R	Q	A	A	D	A	I	S	V	K	I	M	K	C	G	G	L	M	K	A	Q	S	L	M	A	I	A	D	T	A
Template Known Secondary structure			T	T			S						S		T	T												.	.		S	S					S	T	T		S	S											T			S										T	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		319	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		G	Q	L	V	V	P	H	G	.	S	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L	N	R	D	C	N	L	K	R
Query Conservation										.
Alig confidence										.																																																			.	.
Template Conservation																																																													.	.
Template Sequence		G	L	P	G	Y	G	G	T	L	W	E	G	G	I	A	L	A	A	G	T	Q	L	I	A	A	T	P	G	I	S	L	G	C	E	F	Y	M	P	H	H	V	L	T	E	D	V	L	E	E	R	I	A	N	S	A	G	H	V	I	.	.	V	P	D	G	P	G	L	G	I	S	I	S	E	A	S	L	R	G	N
Template Known Secondary structure		T											S													T		T	T	B		S		B			S		T	T	S						S	S	S	S						T	T				.	.				S	S	B	T	S
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		398
Predicted Secondary structure
Query SS confidence
Query Sequence		P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions