Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 86 Aligned Residues 327 % Identity 19% Template c3ijlA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase; PDBTitle: structure of dipeptide epimerase from bacteroides thetaiotaomicron2 complexed with l-pro-d-glu; nonproductive substrate binding. Resolution 1.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S	T	A	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																		.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.											.	.	.
Template Conservation																		.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		K	M	T	F	F	P	Y	E	L	K	L	R	H	V	F	T	.	.	.	.	.	.	.	.	V	A	T	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	T	T	P	D	V	Q	V	E	I	E	Y	E	.	G	V	T	G	Y	G	E	A	S	M	P	P	Y
Template Known Secondary structure																		.	.	.	.	.	.	.	.		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	.	T											G	G
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.																								.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	.	.	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L	L	G	G	A	V	R	D
Query Conservation																			.	.
Alig confidence																			.	.																							.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		L	G	E	T	V	E	S	V	M	N	F	L	K	K	V	N	L	E	Q	F	S	D	P	F	Q	L	E	D	I	L	S	Y	V	D	S	L	S	P	K	D	T	.	.	.	.	.	.	.	A	A	K	A	A	V	D	I	A	L	H	D	L	V	G	K	L	L	G	A	P	W	Y	K	I	W	G	L	N	K	E	K
Template Known Secondary structure		G	S											T	T				T	T				T	T												T		S				.	.	.	.	.	.	.																			T	S	B					T	T			G	G	G
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		163	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure									.																																																												.
Query SS confidence									.																																																												.
Query Sequence		E	I	Q	F	Y	A	T	.	G	A	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	A	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	.	V	N	Y	A	T	K	L	A	H	A	C	A
Query Conservation									.																																																												.
Alig confidence									.																															.	.												.	.															.
Template Conservation																																								.	.												.	.
Template Sequence		T	P	S	T	T	F	T	I	G	I	D	T	P	D	V	V	R	A	K	T	K	E	C	A	G	L	F	N	I	L	K	V	K	L	G	R	D	N	.	.	D	K	E	M	I	E	T	I	R	S	V	.	.	T	D	L	P	I	A	V	D	A	N	Q	G	W	K	D	R	Q	Y	A	L	D	M	I	H	W	L	K
Template Known Secondary structure				B	B			B																		T	T		S	S						S	S	S		.	.										T	T	.	.										T	T
Template Predicted Secondary structure																																								.	.												.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E	I	A	A	I	A	K	S	R	G	Q
Query Conservation
Alig confidence																											.	.																					.
Template Conservation																											.	.																					.
Template Sequence		E	K	G	I	V	M	I	E	Q	P	M	P	K	E	Q	L	D	D	I	A	W	V	T	Q	Q	.	.	S	P	L	P	V	F	A	D	E	S	L	Q	R	L	G	D	V	A	A	L	.	K	G	A	F	T	G	I	N	I	K	L	M	K	C	T	G	M	R	E	A	W	K	M	V	T	L	A	H	A	L	G	M
Template Known Secondary structure			T	T								S		T	T											T	.	.		S	S					S	T	T			S	G	G	G	T	G	G	G	.	B	T	T	B	S										T	S														T	T
Template Predicted Secondary structure																											.	.																					.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		321	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		L	V	V	P	H	G	S	.	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E
Query Conservation									.
Alig confidence									.																						.	.	.	.	.	.																							.	.
Template Conservation																															.	.	.	.	.	.																							.	.
Template Sequence		R	V	M	V	G	C	M	T	E	T	S	C	A	I	S	A	A	S	Q	F	S	P	A	V	D	F	A	D	L	.	.	.	.	.	.	D	G	N	L	L	I	S	N	D	R	F	K	G	V	E	V	V	N	G	K	I	T	.	.	L	N	D	L	P	G	I	G	V	M
Template Known Secondary structure									S											T	T	G	G	G		S					.	.	.	.	.	.		G	G	G	G	B	S					B						T	T				.	.			S		S	B	T			B
Template Predicted Secondary structure																															.	.	.	.	.	.																							.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.							350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions