 |
Job Description | P77215 | Confidence | 68.54% | Date | Thu Jan 5 12:26:27 GMT 2012 |
Rank | 232 | Aligned Residues | 82 |
% Identity | 16% | Template | c3hvyC_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:cystathionine beta-lyase family protein, ynbb b.subtilis |
PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_348457.1) from clostridium acetobutylicum at3 2.00 a resolution
|
Resolution | 2.00 Å |
|
 |
  |   |
224 | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | M | S | Q | D | V | N | Y | A | T | K | L | A | H | A | C | A | P | Y | N | L | K | W | I | E | E | C | . |
. |
. |
. |
. |
. |
. |
. |
L | P | P | Q | Q | Y | E | S | Y | R | E | L | K | R | N | A | P | V | G | M | M | V | T | S | G | E | H | H | G | T | L | Q | S | F | R | T | L | S | E | T | G | I | D | I | M |
Query Conservation |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
|
|
| . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|   |
|   |   |
|
|   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|
|   |   |
|   |   |
|
|
|   |   |
|   |   |
|
|
|   |
|
|
|
|   |
|   |   |
|   |   |
|   |
|
|   |   |
|
|
|
|
|
Template Sequence |   |
D | G | K | V | D | I | N | T | V | K | E | E | L | K | K | D | D | S | I | K | L | I | H | I | Q | R | S | T | G | Y | G | W | R | K | S | L | R | I | A | E | I | A | E | I | I | K | S | I | R | E | V | N | E | N | V | I | V | F | V | D | N | C | Y | G | E | F | V | E | E | K | E | P | T | D | V | G | A | D | I | I |
Template Known Secondary structure |   |
T | T | B |
|
|  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  | S | S |
|
| S | S | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |
| T | T | T | T | T | T | S | S | S |
| G | G | G | G | T |
| S |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
  |
  |   |
296 | . | . | . | 300 | . | |
|
|
|
|
|
|
|
. | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
Q | P | D | V | G | W | . |
. |
. |
. |
. |
. |
. |
. |
C | G | G | L |
Query Conservation |   |
|   |
|   |   |   | . | . | . | . | . | . | . | . |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |
|
|   |
Template Sequence |   |
A | G | S | L | I | K | N | I | G | G | G | I | A | T | T | G | G | Y |
Template Known Secondary structure |   |
 |  |  | T | T | S | G | G | G | T | T | T |
|
| S |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|