Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 24 Aligned Residues 346 % Identity 23% Template c3dipA_ PDB info PDB header:lyase Chain: A: PDB Molecule:enolase; PDBTitle: crystal structure of an enolase protein from the2 environmental genome shotgun sequencing of the sargasso sea Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	K	I	K	Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	R	I	T	A	L	R	T	I	R	L	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	.	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	W	V	E	V	E	T	E	D	G	L	T	G	L	G	E	T
Template Known Secondary structure				B										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.																.	.		.	.																														.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.
		83	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		T	A	.	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L	L	G	G	A	V	R
Query Conservation				.
Alig confidence				.																																							.
Template Conservation																																											.
Template Sequence		F	R	G	A	Q	A	V	E	A	V	L	H	E	Q	T	A	P	A	I	I	G	R	A	A	E	N	I	T	S	I	S	S	E	L	L	N	P	Y	V	G	F	.	G	S	S	S	A	E	V	R	A	A	S	A	V	D	I	A	L	W	D	L	A	G	Q	R	A	G	V	P	L	H	V	A	L	G	G	A	A	R
Template Known Secondary structure			S												T						T	T	S	B	T	T										T			S	S	S		.	S	S																								T	S	B					T	T			S
Template Predicted Secondary structure																																											.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		162	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.														.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure										.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	I	Q	F	Y	A	T	.	G	A	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q
Query Conservation										.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	V	P	V	Y	A	T	C	A	G	Y	D	F	D	A	G	V	L	A	E	S	L	V	A	E	G	Y	A	A	M	K	I	W	P	F	D	D	F	A	S	I	T	P	H	H	I	S	L	T	D	L	K	D	G	L	E	P	F	R	K	I	R	A	A	V	G	Q	R	I	E	I	M	C	E	L	H	S	L	W
Template Known Secondary structure		S										T	T	T													T	T		S						T	T					T	T		T	T																						T	T	S	S							T	T		B
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																												.																																					.
Query SS confidence																												.																																					.
Query Sequence		D	V	N	Y	A	T	K	L	A	H	A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	.	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L
Query Conservation																												.																																					.
Alig confidence																												.													.	.																							.
Template Conservation																																									.	.
Template Sequence		G	T	H	A	A	A	R	I	C	N	A	L	A	D	Y	G	V	L	W	V	E	D	P	I	A	K	M	D	N	I	P	A	V	A	D	L	R	R	Q	.	.	T	R	A	P	I	C	G	G	E	N	L	A	G	T	R	R	F	H	E	M	L	C	A	D	A	I	D	F	V	M	L	D	L	T	W	C	G	G	L
Template Known Secondary structure													G	G	G	G	T		S						B	S		T	T												.	.									T	T			S										T	T			S						T	T	T	S	S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	L	V	E	I	A	A	I	A	K	S	R	G	Q	L	V	V	P	H	G	S	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F
Query Conservation
Alig confidence																								.	.																																																.	.
Template Conservation																								.	.																																																.	.
Template Sequence		S	E	G	R	K	I	A	A	L	A	E	T	H	A	R	P	L	A	P	H	T	G	.	.	P	V	A	L	M	A	G	L	H	L	A	L	H	A	P	T	A	I	F	Q	E	V	V	R	A	S	L	A	T	W	Y	A	D	L	V	D	H	L	P	V	I	Q	E	G	I	A	L	.	.	A	P	T	R	P	G	L
Template Known Secondary structure														T	T									.	.															T	T	B								T	T	S			T					B	S							T	T				.	.				S	S	B	T
Template Predicted Secondary structure																								.	.																																																.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	L	N	R	D	C	N	L	K	R	P	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	A	L	L	P	H	V	R	K	I	A	G	A	V
Template Known Secondary structure		S			B		T	T	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions