Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 40 Aligned Residues 342 % Identity 26% Template c3cb3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of l-talarate dehydratase from polaromonas sp. js6662 complexed with mg and l-glucarate Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	K	I	K	Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	R	I	T	W	V	R	I	S	S	C	Y	L	P	L	A	T	P	I	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	I	A	I	L	F	A	E	I	E	T	A	G	G	H	Q	G	L	G	F	S
Template Known Secondary structure																		S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30																																						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
		83	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		T	A	.	.	.	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L	L	G	G	A
Query Conservation				.	.	.
Alig confidence				.	.	.																																							.
Template Conservation																																													.
Template Sequence		Y	S	K	R	A	G	G	P	G	Q	F	A	H	A	R	E	I	A	P	A	L	I	G	E	D	P	S	D	I	A	K	L	W	D	K	L	C	W	A	G	A	S	A	.	G	R	S	G	L	S	T	Q	A	I	G	A	F	D	V	A	L	W	D	L	K	A	K	R	A	G	L	S	L	A	K	L	L	G	S	Y
Template Known Secondary structure				S	S	T	T												G	G	G	G	T	T	S		T	T													T	G	G	G	.		S	S	S																						T		B								S
Template Predicted Secondary structure																																													.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure													.	.	.	.	.																										.
Query SS confidence													.	.	.	.	.																										.
Query Sequence		V	R	D	E	I	Q	F	Y	A	T	G	.	.	.	.	.	A	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	.	D	A	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y	A	T
Query Conservation													.	.	.	.	.																										.
Alig confidence		.											.	.	.	.	.																										.
Template Conservation		.
Template Sequence		.	R	D	S	V	R	C	Y	N	T	S	G	G	F	L	H	T	P	I	D	Q	L	M	V	N	A	S	A	S	I	E	R	G	I	G	G	I	K	L	K	V	G	Q	P	D	G	A	L	D	I	A	R	V	T	A	V	R	K	H	L	G	D	A	V	P	L	M	V	D	A	N	Q	Q	W	D	R	P	T	A	Q
Template Known Secondary structure		.		S						B		T	T			T	T	S															T	T											S																		T	T	S							T	T
Template Predicted Secondary structure		.
Template SS confidence
			144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		K	L	A	H	A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E	I	A
Query Conservation																																																										.
Alig confidence																																		.	.																							.
Template Conservation																																		.	.
Template Sequence		R	M	C	R	I	F	E	P	F	N	L	V	W	I	E	E	P	L	D	A	Y	D	H	E	G	H	A	A	L	A	L	Q	.	.	F	D	T	P	I	A	T	G	E	M	L	T	S	A	A	E	H	G	D	L	I	R	H	R	A	A	D	Y	L	M	P	D	A	P	R	V	G	G	I	T	P	F	L	K	I	A
Template Known Secondary structure								G	G	G			S						S		T	T												.	.		S	S						T	T			S											T			S										T	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	K	S	R	G	Q	L	V	V	P	H	G	S	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L	N	R	D
Query Conservation
Alig confidence																	.	.	.	.	.																					.	.	.	.	.																				.	.
Template Conservation																	.	.	.	.	.																					.	.	.	.	.																				.	.
Template Sequence		S	L	A	E	H	A	G	L	M	L	A	P	H	F	A	.	.	.	.	.	M	E	L	H	V	H	L	A	A	A	Y	P	R	E	P	W	V	E	H	F	.	.	.	.	.	E	W	L	E	P	L	F	N	E	R	I	E	I	R	D	G	R	M	L	.	.	V	P	T	R	P	G	L	G	L	T	L	S	G	Q
Template Known Secondary structure							T	T							S		.	.	.	.	.										T	S	S	S								.	.	.	.	.		T	T	G	G	G	B	S							T	T				.	.				S	S	B	T				B		T
Template Predicted Secondary structure																	.	.	.	.	.																					.	.	.	.	.																				.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.						.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.
		393	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	N	L	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	A	W	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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