Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 31 Aligned Residues 360 % Identity 22% Template c3bjsB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from polaromonas2 sp. js666 Resolution 2.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	K	Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S	T	A
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	K	I	N	A	I	P	L	S	Y	R	L	P	T	V	T	M	.	.	.	.	.	.	.	.	G	V	G	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	R	D	A	I	I	I	R	V	E	T	S	E	G	I	T	G	Y	G	E	A	H	P
Template Known Secondary structure		B																			.	.	.	.	.	.	.	.	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.																									.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
					85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L	L	G	G	A	V	R
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		G	R	S	P	G	A	I	T	S	L	I	H	N	T	I	A	P	M	L	I	G	M	K	A	T	D	C	V	G	A	W	Q	R	V	H	R	M	Q	L	S	S	H	G	L	G	A	G	A	A	L	A	I	S	G	I	D	M	A	L	W	D	I	R	G	K	A	A	N	M	P	L	Y	E	L	L	G	G	S	K	R
Template Known Secondary structure		T	T												T	T	T	T	T	T	T	T	S	B	T	T													T	T	S	S	S	S		T																							T		B					T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		D	E	I	Q	F	Y	A	T	G	.	.	.	.	A	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	A	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y	A	T	K	L	A	H
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.
Template Conservation
Template Sequence		R	I	P	A	Y	A	G	G	I	A	L	G	Y	Q	P	K	E	S	L	A	E	E	A	Q	E	Y	I	A	R	G	Y	K	A	L	K	L	R	I	G	D	A	A	R	V	D	I	E	R	V	R	H	V	R	K	V	L	G	D	E	V	D	I	L	T	D	A	N	T	A	Y	T	M	A	D	A	R	R	V	L	P
Template Known Secondary structure									S	S		S		S	S															T	T		S								S																		T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E	I	A	A	I	A	K
Query Conservation																																																						.
Alig confidence																																.																						.
Template Conservation																																.
Template Sequence		V	L	A	E	I	Q	A	G	W	L	E	E	P	F	A	C	N	D	F	A	S	Y	R	E	V	A	K	I	T	P	.	L	V	P	I	A	A	G	E	N	H	Y	T	R	F	E	F	G	Q	M	L	D	A	G	A	V	Q	V	W	Q	P	D	L	S	K	C	G	G	I	T	E	G	I	R	I	A	A	M	A	S
Template Known Secondary structure						T	T		S						S		T	T									T	T	T		S	.	S	S						T	T																						B	T	T	T	S	S
Template Predicted Secondary structure																																.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	G	Q	L	V	V	P	H	G	S	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L	N	R	D	C	N	L	K
Query Conservation
Alig confidence																																										.																			.	.
Template Conservation																																										.																			.	.
Template Sequence		A	Y	R	I	P	I	N	A	H	S	S	A	T	G	L	N	H	A	A	T	I	H	F	L	A	A	T	E	N	A	G	Y	F	E	A	C	V	S	K	F	.	N	P	F	R	D	M	F	G	T	F	E	I	G	A	D	G	C	V	.	.	E	P	P	D	A	P	G	L	G	I	E	V	D	E	S	I	F	E	K
Template Known Secondary structure			T	T			B			B			S	S															T	T	B									S	S	.		T	T	T	T	S	S							T	T	S			.	.				S	S	S	B	T						G	G	G	T	T	T
Template Predicted Secondary structure																																										.																			.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.			.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		397	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	P	A	V
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions