Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 59 Aligned Residues 339 % Identity 21% Template c2rdxG_ PDB info PDB header:structural genomics, unknown function Chain: G: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, putative; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from roseovarius nubinhibens ism Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		K	I	K	Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S	T	.
Query Conservation																																																																																	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	T	R	I	R	L	Y	K	T	D	L	P	Y	V	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	A	R	A	S	V	V	V	I	D	T	D	A	G	L	Q	G	C	G	E	F	T	P
Template Known Secondary structure															B	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T									B
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.																																								.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.
									84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L	L
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																									.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.
Template Sequence		C	G	E	N	Y	M	I	A	H	S	E	G	V	D	A	F	A	R	L	A	A	P	Q	L	L	G	Q	D	P	R	Q	V	A	R	M	E	R	L	M	D	H	L	V	Q	G	H	G	.	.	.	.	.	.	.	Y	A	K	A	P	F	D	A	A	F	W	D	I	L	G	Q	A	T	G	Q	P	V	W	M	L	L
Template Known Secondary structure		S	S	T	T	S	S	S			T	T														T	T	S		T	T													S	S	S			.	.	.	.	.	.	.																			T		B					T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		G	G	A	V	R	D	E	I	Q	F	Y	A	T	G	.	.	A	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	A	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y	A	T	K
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		G	G	K	L	C	D	G	A	P	M	Y	R	V	A	P	Q	R	S	E	A	E	T	R	A	E	L	A	R	H	R	A	A	G	Y	R	Q	F	Q	I	K	V	G	A	D	W	Q	S	D	I	D	R	I	R	A	C	L	P	L	L	E	P	G	E	K	A	M	A	D	A	N	Q	G	W	R	V	D	N	A	I	R
Template Known Secondary structure		T			S		S	S			B							S															T	T										S													G	G	G	S		T	T								S	S		S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		L	A	H	A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E	I	A	A
Query Conservation																																																									.
Alig confidence												.								.	.												.	.																							.
Template Conservation												.								.	.												.	.
Template Sequence		L	A	R	A	T	R	D	L	D	Y	.	I	L	E	Q	P	C	R	.	.	S	Y	E	E	C	Q	Q	V	R	R	V	.	.	A	D	Q	P	M	K	L	D	E	C	V	T	G	L	H	M	A	Q	R	I	V	A	D	R	G	A	E	I	C	C	L	K	I	S	N	L	G	G	L	S	K	A	R	R	T	R	D
Template Known Secondary structure						T	T	T				.						S	S	.	.	S									T	T	.	.			S						T	T			S											T			S						T	T	T	T	T	S
Template Predicted Secondary structure												.								.	.												.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		314	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		I	A	K	S	R	G	Q	L	V	V	P	H	G	S	.	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L	N	R	D
Query Conservation																.
Alig confidence																.																														.																				.	.
Template Conservation																																														.																				.	.
Template Sequence		F	L	I	D	N	R	M	P	V	V	A	E	D	S	W	G	G	E	I	A	S	A	A	V	A	H	F	A	A	S	T	P	E	E	F	L	I	N	S	T	D	L	M	N	.	Y	N	T	R	S	T	G	L	G	G	P	T	V	H	Q	G	R	L	Y	.	.	A	S	D	T	P	G	L	G	V	T	P	D	F	N
Template Known Secondary structure						T	T								S	B		S													T	S		G	G	G	B			B			G	G	G	.	G	B	S	S		S									T	T				.	.				S	S	B	T	S
Template Predicted Secondary structure																																														.																				.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.
		393	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	N	L	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	G	A	P
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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