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Job DescriptionP77215
Confidence100.00%DateThu Jan 5 12:26:27 GMT 2012
Rank23Aligned Residues350
% Identity27%Templatec2qq6B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme- PDBTitle: crystal structure of mandelate racemase/muconate2 lactonizing enzyme-like protein from rubrobacter3 xylanophilus dsm 9941
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  TLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATPMSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAV
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Template Sequence  SAPRITRVETAAIRAVGP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SVLVRVWAGDE. HGLGE
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SSS.............................................TT.
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Query Sequence  STA. . GEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLSATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGA
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Template Sequence  CYPSAPAAGIHHIVXNXEEQLLGEDPRDVERLYEKXRRWNIFTGGQAGAVITALSGIETALWDLAGKLQGVPVYRLLGGA
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S
TGGGTTT

TT
TTTTTTTSSTS
GGGTTT

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   160.........170. ........180.........190...... ...200...
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Query Sequence  VRDEIQFYATGA. . . . . . . . . . . . . . . . . . . RPDLAKEMGFIGGKMPTHWGPHDGD. . . . . . . . . . . . . . . . . AGIRKDA
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Template Sequence  FRRRVRLYADCNAGTVDAAAHHIEGGLFEEGSNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAXV
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STTGGG

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   116...120.........130.........140.........150.........160.........170.........180.........190.....
 
   204.....210.........220.........230.........240.........250.........260.........270.........280...
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Query Sequence  AMVADMREKCGEDFWLMLDCWMSQDVNYATKLAHACAPYNLKWIEECLPPQQYESYRELKRNAPVGMMVTSGEHHGTLQS
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Template Sequence  ARVAAVREAVGPEVEVAIDXHGRFDIPSSIRFARAXEPFGLLWLEEPTPPENLDALAEVRRS. . TSTPICAGENVYTRFD
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TT


GGGT
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   196...200.........210.........220.........230.........240.........250....... ..260.........270...
 
   284..... 290.........300.........310.........320.........330.........340.........350.........360..
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Query Sequence  FRTLSE. TGIDIMQPDVGWCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTMRPQFDP
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Template Sequence  FRELFAKRAVDYVXPDVAKCGGLAEAKRIANLAELDYIPFAPHNVSSPVGTVAAAHVCAAVSNFAVLEWHAIDXPHWEDF
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   274.....280.........290.........300.........310.........320.........330.........340.........350...
 
   363.... ..370.........380.........390.........400.
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Query Sequence  ILLNE. PVPVNGRIHKSVLDKPGFGVELNRDCNLKRPYSH
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Template Sequence  VRYPGGPVIREGHIE. . LTEEPGLGLELDEEAAFEHRHEK
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SGGG

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   354.....360........ .370.........380.........390.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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