Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 20 Aligned Residues 330 % Identity 23% Template c2qjjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of d-mannonate dehydratase from novosphingobium2 aromaticivorans Resolution 1.80 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S	T	.	.	.	A	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L
Query Conservation																						.	.	.
Alig confidence																						.	.	.																																							.	.
Template Conservation																																																															.	.
Template Sequence		N	F	V	T	L	K	I	E	T	D	Q	G	V	Y	G	I	G	D	A	T	L	N	G	R	E	L	S	V	V	A	Y	L	Q	E	H	V	A	P	C	L	I	G	M	D	P	R	R	I	E	D	I	W	Q	Y	V	Y	R	G	A	Y	W	.	.	R	R	G	P	V	T	M	R	A	I	A	A	V	D	M	A	L
Template Known Secondary structure											T	T	S										T	T												T						T	T	S		T	T													T	S	S	.	.
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																.	.	200	.	.	.
Predicted Secondary structure																															.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L	L	G	G	A	V	R	D	E	I	Q	F	Y	A	T	.	.	G	A	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	R	K	D	A
Query Conservation																															.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	D	I	K	A	K	M	A	G	M	P	L	Y	Q	L	L	G	G	R	S	R	D	G	I	M	V	Y	G	H	A	N	G	S	D	I	A	E	T	V	E	A	V	G	H	Y	I	D	M	G	Y	K	A	I	R	A	Q	T	G	V	P	G	I	S	L	P	S	V	T	G	W	D	T	R	K	A	L	N	Y	V	P
Template Known Secondary structure										T	S	B						T			S		S	S										S	S														T	T		S									T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y	A	T	K	L	A	H	A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S
Query Conservation
Alig confidence																																																																.	.
Template Conservation																																																																.	.
Template Sequence		K	L	F	E	E	L	R	K	T	Y	G	F	D	H	H	L	L	H	D	G	H	H	R	Y	T	P	Q	E	A	A	N	L	G	K	M	L	E	P	Y	Q	L	F	W	L	E	D	C	T	P	A	E	N	Q	E	A	F	R	L	V	R	Q	H	.	.	T	V	T	P	L	A	V	G	E	I	F	N	T	I	W	D
Template Known Secondary structure													S	S	S							T	T		S													G	G	G			S				S		S			S	S	G	G	G	G							.	.			S						T	T			S	G	G	G
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		284	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure								.																																								.	.
Query SS confidence								.																																								.	.
Query Sequence		F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E	I	A	A	I	A	K	S	R	G	Q	L	V	V	P	H	G	S	S	.	.	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F
Query Conservation								.																																								.	.
Alig confidence								.																																								.	.																								.	.
Template Conservation																																																																									.	.
Template Sequence		A	K	D	L	I	Q	N	Q	L	I	D	Y	I	R	A	T	V	V	G	A	G	G	L	T	H	L	R	R	I	A	D	L	A	S	L	Y	Q	V	R	T	G	C	H	G	A	T	D	L	S	P	V	T	M	G	C	A	L	H	F	D	T	W	V	P	N	F	G	I	Q	E	Y	.	.	M	R	H	T	E	E	T
Template Known Secondary structure		T						T	T			S						T	T	T	T	T															T	T									T	T	S																T	T	B						.	.
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L	N	R	D	C	N	L	K	R	P	Y	S	H
Query Conservation
Alig confidence																		.	.
Template Conservation																		.	.
Template Sequence		D	A	V	F	P	H	D	Y	W	F	E	K	G	E	L	F	.	.	V	G	E	T	P	G	H	G	V	D	I	D	E	E	L	A	A	K	Y	P	Y	K	P
Template Known Secondary structure					S		B	S					T	T				.	.					S	B	S	S	B								T	T	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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