Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 70 Aligned Residues 351 % Identity 16% Template c2qddA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from roseovarius2 nubinhibens ism Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		K	I	K	Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S	T	.
Query Conservation																																																																																	.
Alig confidence																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	T	R	L	T	V	F	H	L	D	L	P	L	A	K	P	Y	W	.	.	.	.	.	.	.	.	L	S	G	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	R	L	D	S	T	Y	L	R	I	D	T	D	E	G	V	T	G	W	G	E	G	C	P
Template Known Secondary structure																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20									.	.	.	.	.																								.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
									84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L	L
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																									.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.
Template Sequence		W	G	H	S	Y	L	P	A	H	G	P	G	L	R	A	G	I	A	T	L	A	P	H	L	L	G	L	D	P	R	S	L	D	H	V	N	R	V	M	D	L	Q	L	P	G	H	S	.	.	.	.	.	.	.	Y	V	K	S	P	I	D	M	A	C	W	D	I	L	G	Q	V	A	G	L	P	L	W	Q	L	L
Template Known Secondary structure		S	T	T	T	S	S	S																		T	T			T	T													S		S			.	.	.	.	.	.	.																			T		B					T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure															.	.																												.
Query SS confidence															.	.																												.
Query Sequence		G	G	A	V	R	D	E	I	Q	F	Y	A	T	.	.	G	A	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	.	A	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y	A	T
Query Conservation															.	.																												.
Alig confidence															.	.																												.
Template Conservation
Template Sequence		G	G	E	A	A	T	P	V	P	I	N	S	S	I	S	T	G	T	P	D	Q	M	L	G	L	I	A	E	A	A	A	Q	G	Y	R	T	H	S	A	K	I	G	G	S	D	P	A	Q	D	I	A	R	I	E	A	I	S	A	G	L	P	D	G	H	R	V	T	F	D	V	N	R	A	W	T	P	A	I	A	V
Template Known Secondary structure		T		S	S						B						S																	T										S	S															S			T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		K	L	A	H	A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E	I	A
Query Conservation																																																										.
Alig confidence												.	.											.	.									.	.																							.
Template Conservation												.	.											.	.									.	.
Template Sequence		E	V	L	N	S	V	R	A	R	D	.	.	W	I	E	Q	P	C	Q	T	L	D	.	.	Q	C	A	H	V	A	R	R	.	.	V	A	N	P	I	M	L	D	E	C	L	H	E	F	S	D	H	L	A	A	W	S	R	G	A	C	E	G	V	K	I	K	P	N	R	V	G	G	L	T	R	A	R	Q	I	R
Template Known Secondary structure					T	S						.	.						S	S	S			.	.							T	T	.	.			S						T	T			S											T			S										T	S
Template Predicted Secondary structure												.	.											.	.									.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		A	I	A	K	S	R	G	Q	L	V	V	P	H	G	S	.	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L	N	R
Query Conservation																	.
Alig confidence																	.																																																	.	.
Template Conservation																																																																		.	.
Template Sequence		D	F	G	V	S	V	G	W	Q	M	H	I	E	D	V	G	G	T	A	L	A	D	T	A	A	L	H	L	A	A	S	T	P	E	A	N	R	L	A	S	W	L	G	H	A	H	L	A	D	D	P	I	P	G	Q	G	A	R	N	R	D	G	L	A	.	.	T	P	P	S	A	P	G	L	G	V	I	P	D	P
Template Known Secondary structure								T								S	S															T	S		T	T	T	B			B			G	G	G	G	B	S			S	S	T	T		S				B	T	T			.	.					S	S	B	T						G
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.
		392	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	N	L	K	R	P	Y	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	L	G	R	P	V	A	S	Y
Template Known Secondary structure		G	G	S		S		S
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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