Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 6 Aligned Residues 355 % Identity 24% Template c2pp1C_ PDB info PDB header:lyase Chain: C: PDB Molecule:l-talarate/galactarate dehydratase; PDBTitle: crystal structure of l-talarate/galactarate dehydratase from2 salmonella typhimurium lt2 liganded with mg and l-lyxarohydroxamate Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	P	K	I	K	Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V
Query Conservation
Alig confidence																											.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	D	R	I	E	W	V	K	L	S	L	A	F	L	P	L	A	T	P	V	S	D	A	K	.	.	V	L	T	G	R	Q	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	E	V	A	I	I	I	A	E	I	R	S	R	D	G	F	E	G	V	G	F
Template Known Secondary structure			S																								.	.			T	T	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	S
Template Predicted Secondary structure																											.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.																								.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		82	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		S	T	.	.	.	A	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L	L	G	G
Query Conservation				.	.	.
Alig confidence				.	.	.																																								.
Template Conservation																																														.
Template Sequence		S	Y	S	K	R	A	G	G	Q	G	I	Y	A	H	A	K	E	I	A	D	N	L	L	G	E	D	P	N	D	I	D	K	I	Y	T	K	L	L	W	A	G	A	S	V	.	G	R	S	G	M	A	V	Q	A	I	S	P	I	D	I	A	L	W	D	M	K	A	K	R	A	G	L	P	L	A	K	L	L	G	A
Template Known Secondary structure					S	S	T	T												G	G	G	G	T	T			T	T													T	G	G	G	.		S	S	T																					T	T	S	B
Template Predicted Secondary structure																																														.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																.	.	.	.	.																										.
Query SS confidence																.	.	.	.	.																										.
Query Sequence		A	V	R	D	E	I	Q	F	Y	A	T	G	A	R	.	.	.	.	.	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	A	.	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y	A
Query Conservation																.	.	.	.	.																										.
Alig confidence			.													.	.	.	.	.																										.
Template Conservation			.
Template Sequence		H	.	R	D	S	V	Q	C	Y	N	T	S	G	G	F	L	H	T	P	L	D	Q	V	L	K	N	V	V	I	S	R	E	N	G	I	G	G	I	K	L	K	V	G	Q	P	N	C	A	E	D	I	R	R	L	T	A	V	R	E	A	L	G	D	E	F	P	L	M	V	D	A	N	Q	Q	W	D	R	E	T	A
Template Known Secondary structure		S	.		S								T	T	S		T	T	S															T	T											S																		S	S	S							T	T
Template Predicted Secondary structure			.
Template SS confidence
		158		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		T	K	L	A	H	A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E	I
Query Conservation																																																											.
Alig confidence																																			.	.																							.
Template Conservation																																			.	.
Template Sequence		I	R	M	G	R	K	M	E	Q	F	N	L	I	W	I	E	E	P	L	D	A	Y	D	I	E	G	H	A	Q	L	A	A	A	.	.	L	D	T	P	I	A	T	G	E	M	L	T	S	F	R	E	H	E	Q	L	I	L	G	N	A	S	D	F	V	Q	P	D	A	P	R	V	G	G	I	S	P	F	L	K	I
Template Known Secondary structure									G	G	G			S						S		T	T												.	.		S	S						T	T			S										T	T			S										T	S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	A	K	S	R	G	Q	L	V	V	P	H	G	S	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L	N	R
Query Conservation
Alig confidence																		.	.	.	.	.																			.	.	.	.	.																						.	.
Template Conservation																		.	.	.	.	.																			.	.	.	.	.																						.	.
Template Sequence		M	D	L	A	A	K	H	G	R	K	L	A	P	H	F	A	.	.	.	.	.	M	E	V	H	L	H	L	S	A	A	Y	P	L	E	P	W	L	E	.	.	.	.	.	H	F	E	W	L	N	P	L	F	N	E	Q	L	E	L	R	D	G	R	M	W	.	.	I	S	D	R	H	G	L	G	F	T	L	S	E
Template Known Secondary structure								T	T							S		.	.	.	.	.										T		S	S						.	.	.	.	.			S	T	T	G	G	G	B	S							T	T				.	.			S		S	B	T				B
Template Predicted Secondary structure																		.	.	.	.	.																			.	.	.	.	.																						.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330						.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.						.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.	.	.	.	380	.	.
		392	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	N	L	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	R	R	W	T
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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