Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 68 Aligned Residues 350 % Identity 20% Template c2pmqA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a mandelate racemase/muconate lactonizing enzyme2 from roseovarius sp. htcc2601 Resolution 1.72 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		K	I	K	Q	V	R	A	W	F	T	G	G	A	T	.	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S	T
Query Conservation																.
Alig confidence																.						.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	A	E	I	Q	L	F	Q	H	D	L	P	V	V	N	G	P	Y	R	.	.	.	.	.	.	.	.	I	A	S	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	W	S	L	T	T	T	I	V	K	I	I	A	E	D	G	T	I	G	W	G	E	T	C
Template Known Secondary structure																T	T			B		.	.	.	.	.	.	.	.		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	S												T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.									.	.	.	.	.																								.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
		84	.	.									.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.
Query Sequence		A	G	E	.	.	.	.	.	.	.	.	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L
Query Conservation					.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.
Template Sequence		P	V	G	P	T	Y	A	E	A	H	A	G	G	A	L	A	A	L	E	V	L	A	S	G	L	A	G	A	E	A	L	P	L	P	L	H	T	R	X	D	S	L	L	C	G	H	N	.	.	.	.	.	.	.	.	Y	A	K	S	A	L	D	I	A	V	H	D	L	W	G	K	R	L	G	V	P	V	H	E	L
Template Known Secondary structure			S	S	S	S	S	S	S																T	T	T	T			S	S													S				.	.	.	.	.	.	.	.																			T		B
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.									.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																		.	.																											.																	.
Query SS confidence																		.	.																											.																	.
Query Sequence		L	G	G	A	V	R	D	E	I	Q	F	Y	A	T	G	A	.	.	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	A	.	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	.	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y
Query Conservation																		.	.																											.																	.
Alig confidence																		.	.																											.																	.
Template Conservation
Template Sequence		L	G	G	A	L	T	D	S	V	S	S	Y	Y	S	L	G	V	X	E	P	D	E	A	A	R	Q	A	L	E	K	Q	R	E	G	Y	S	R	L	Q	V	K	L	G	A	R	P	I	E	I	D	I	E	A	I	R	K	V	W	E	A	V	R	G	T	G	I	A	L	A	A	D	G	N	R	G	W	T	T	R	D
Template Known Secondary structure		T	T			S		S										S																	T		S								S	S																	T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		A	T	K	L	A	H	A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E
Query Conservation																																																												.
Alig confidence															.							.	.													.	.																							.
Template Conservation															.							.	.													.	.
Template Sequence		A	L	R	F	S	R	E	C	P	D	I	P	F	.	V	X	E	Q	P	C	.	.	N	S	F	E	D	L	E	A	I	R	P	L	.	.	C	H	H	A	L	Y	X	D	E	D	G	T	S	L	N	T	V	I	T	A	A	A	T	S	L	V	D	G	F	G	X	K	V	S	R	I	G	G	L	Q	H	X	R	A
Template Known Secondary structure										T	T	S			.				S		S	.	.	S	S								G	G	G	.	.			S					S	T	T			S										T	T			S					B					T	S
Template Predicted Secondary structure															.							.	.													.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		I	A	A	I	A	K	S	R	G	Q	L	V	V	P	H	G	.	S	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L
Query Conservation																		.
Alig confidence																		.																																																			.	.
Template Conservation																																																																					.	.
Template Sequence		F	R	D	F	C	A	A	R	N	L	P	H	T	C	D	D	A	W	G	G	D	I	V	S	A	A	C	T	H	I	A	S	T	V	L	P	R	L	X	E	G	A	W	L	A	Q	P	Y	V	A	E	H	Y	D	A	E	N	G	V	R	I	E	G	G	R	I	R	.	.	V	P	Q	G	P	G	L	G	L	T	I
Template Known Secondary structure										T						B		S	S		S												T	T	S		G	G	G							S	G	G	G		S			S	S	T	T	T						T	T				.	.				S	S	B	T	S
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	D	C	N	L	K	R	P	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	E	R	F	G	P	P	L	F	S
Template Known Secondary structure			T	T	T	T		S		S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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