Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 30 Aligned Residues 356 % Identity 21% Template c2pgwC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of a putative muconate cycloisomerase from2 sinorhizobium meliloti 1021 Resolution 1.95 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		K	I	K	Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S	.	.
Query Conservation																																																																																.	.
Alig confidence																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	S	N	V	R	V	R	P	L	V	L	P	L	K	Q	P	Y	H	.	.	.	.	.	.	.	.	W	S	Y	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	S	F	A	V	N	L	I	E	I	E	A	D	D	G	T	V	G	I	G	E	C	T	V
Template Known Secondary structure																					.	.	.	.	.	.	.	.		S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.									.	.	.	.	.																								.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		T	A	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	.	.	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L	L	G	G	A	V
Query Conservation																																									.	.
Alig confidence																																									.	.
Template Conservation
Template Sequence		A	P	D	Q	T	G	T	A	A	I	L	Y	R	L	A	K	H	L	V	G	H	S	P	H	D	V	A	P	L	I	A	R	I	F	H	Q	E	Y	L	G	H	G	A	N	I	X	R	A	A	N	Q	I	F	S	G	I	D	X	A	X	W	D	L	Q	G	K	L	A	G	L	P	V	H	Q	L	L	G	G	A	H
Template Known Secondary structure		T	T															T	T	T	T	S		G	G	G													T	G	G	G	T																											T		B	G	G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		161	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		R	D	E	I	Q	F	Y	A	T	G	.	.	A	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	A	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y	A	T	K	L	A	H	A
Query Conservation												.	.
Alig confidence												.	.																																													.
Template Conservation																																																										.
Template Sequence		R	K	A	V	G	Y	F	Y	F	L	Q	G	E	T	A	E	E	L	A	R	D	A	A	V	G	H	A	Q	G	E	R	V	F	Y	L	K	V	G	R	G	E	K	L	D	L	E	I	T	A	A	V	R	G	E	I	G	.	D	A	R	L	R	L	D	A	N	E	G	W	S	V	H	D	A	I	N	X	C	R	K
Template Known Secondary structure		S	S				B							S	S														T	T										S														T	T	S	T	.	T								T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E	I	A	A	I	A	K	S
Query Conservation																																																					.
Alig confidence																													.	.																							.
Template Conservation																													.	.
Template Sequence		L	E	K	Y	D	I	E	F	I	E	Q	P	T	V	S	W	S	I	P	A	X	A	H	V	R	E	K	.	.	V	G	I	P	I	V	A	D	Q	A	A	F	T	L	Y	D	V	Y	E	I	C	R	Q	R	A	A	D	X	I	C	I	G	P	R	E	I	G	G	I	Q	P	X	X	K	A	A	A	V	A	E	A
Template Known Secondary structure			G	G	G			S						S		T	T												.	.		S	S					S	T	T			S										T	T			S										T	S
Template Predicted Secondary structure																													.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		318	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		R	G	Q	L	V	V	P	H	G	S	.	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L	N	R	D	C	N	L	K
Query Conservation												.
Alig confidence												.																								.																										.	.
Template Conservation																																				.																										.	.
Template Sequence		A	G	L	K	I	C	I	H	S	S	F	T	T	G	I	T	T	C	A	E	H	H	I	G	L	A	I	P	N	L	D	D	G	N	.	Q	I	X	W	Q	L	V	Q	E	D	I	V	S	S	P	D	L	T	P	K	N	G	W	L	D	.	.	A	F	R	K	P	G	L	G	F	Q	L	A	E	D	L	V	A	E
Template Known Secondary structure		T	T									S																	S	S	B		S	S	B	.				G	G	G	B	T	T		S				S					B	T	T				.	.				S	S	B	T
Template Predicted Secondary structure																																				.																										.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		397
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		368

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions