Job Description P77215 Confidence 26.94% Date Thu Jan 5 12:26:27 GMT 2012 Rank 323 Aligned Residues 111 % Identity 9% Template c2p3eA_ PDB info PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of aq1208 from aquifex aeolicus Resolution 1.99 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	.	.	L	D	C	W	M	S	Q	D	V	N	Y	A	T	K	L	A	H	A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G
Query Conservation																									.	.
Alig confidence																		.							.	.						.	.	.	.	.	.														.				.	.	.	.
Template Conservation																		.														.	.	.	.	.	.														.				.	.	.	.
Template Sequence		S	S	N	F	I	K	E	R	F	E	A	Y	R	K	A	F	.	P	D	A	L	I	C	Y	A	V	K	A	N	F	.	.	.	.	.	.	N	P	H	L	V	K	L	L	G	E	L	G	A	.	G	A	D	.	.	.	.	I	V	S	G	G	E	L	Y	L	A	K	K	A	G	I	P	P	E	R	I	V	Y	A
Template Known Secondary structure																	S	.	T	T	S						G	G	G			.	.	.	.	.	.											T	T		.				.	.	.	.		S	S										T	T			G	G	G
Template Predicted Secondary structure																		.														.	.	.	.	.	.														.				.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	H	G	T	L	Q	S	F	R	T	L	S	E	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E	I	A	A	I	A	K	S	R	G	Q	L	V	V	P	H
Query Conservation
Alig confidence																									.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		G	V	G	K	T	E	K	E	L	T	D	A	V	D	S	E	I	L	M	F	N	V	E	.	.	.	.	.	S	R	Q	E	L	D	V	L	N	E	I	A	G	K	L	G	K	K	A	R	I	A
Template Known Secondary structure		S	S													T	T		S						.	.	.	.	.																T
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions