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Job DescriptionP77215
Confidence100.00%DateThu Jan 5 12:26:27 GMT 2012
Rank88Aligned Residues325
% Identity15%Templatec2oktA_
PDB info PDB header:lyaseChain: A: PDB Molecule:o-succinylbenzoic acid synthetase; PDBTitle: crystal structure of o-succinylbenzoic acid synthetase from2 staphylococcus aureus, ligand-free form
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  KIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATPMSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAVSTA
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Template Sequence  KLTALHFYKYSEPFKSQIV. . . . . . . . TPKVT. . . . . . . . . . . . . . . . . . . . . . . LTHRDCLFIELIDDKGNAYFGECNA
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   2.......10.........20 ..... ....30.........40.........50
 
   85 ....90.........100.........110.........120.........130.........140.........150.....
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Query Sequence  G. . . . . . . . . EMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLSATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKL
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Template Sequence  FQTDWYDHETIASVKHVIEQWFEDNRNKSFETYEAALKLVDSLENTP. . . . . . . . AARATIVMALYQMFHV. . . LPSFSV
Template Known Secondary structure  BSSTTS
S
BTT

B
STTGGGTT
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   51........60.........70.........80.........90....... ..100.........110... ......
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  LGGAVRDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFWLMLDCWMSQDVNYATKL
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Template Sequence  AYGATASGLS. . . . . . . . . . . NKQLESLKATKPTRIKLKWTPQ. . . IMHQIRVLRE. LDFHFQLVIDANESLDRQDFTQL
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TT...TT.SSS


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GGG
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   120......... 130.........140.........150. ........160. ........170.........180....
 
   236...240.........250.........260.........270.........280......... 290.........300.........310....
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Query Sequence  AHACAPYNLKWIEECLPPQQYESYRELKRNAPVGMMVTSGEHHGTLQSFRTLSE. TGIDIMQPDVGWCGGLTTLVEIAAI
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Template Sequence  . QLLAREQVLYIEEPFKDIS. . MLDEVADG. . TIPPIALDEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDT
Template Known Secondary structure  .GGG



SSGG..GGGGS
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TSGGG
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   185....190.........200... ......210. ........220.........230.........240.........250.........
 
   315....320....... ..330.........340.........350.........360.........370.........380.........390...
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Query Sequence  AKSRGQLVVPHGS. SVYSHHAVITFTNTPFSEFLMTSPDCSTMRPQFDPILLNEPVPVNGRIHKSVLDKPGFGVELNRDC
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Template Sequence  LKSHGAKVVIGGMYEYGLSRYFTAML. ARKGDY. . PGDVTPAGYYFEQDVVAHSGILKEGRLEF. . . . RPPL. . . VDITQ
Template Known Secondary structure  TT
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.TTSSS..

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   260.........270.........280..... ....290. ........300.........310.........320 .... .....
 
   394.....400.
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Query Sequence  NLKRPYSH
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Template Sequence  LQPYEGHH
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   330.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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