Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 35 Aligned Residues 351 % Identity 18% Template c2chrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:chloromuconate cycloisomerase; PDBTitle: a re-evaluation of the crystal structure of chloromuconate2 cycloisomerase Resolution 3.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		K	I	K	Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S	T	.
Query Conservation																																																																																	.
Alig confidence																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.										.
Template Conservation																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		K	I	D	A	I	E	A	V	I	V	D	V	P	T	K	R	P	I	Q	.	.	.	.	.	.	.	.	M	S	I	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	Q	Q	S	Y	V	I	V	R	V	Y	S	E	.	G	L	V	G	V	G	E	G	G	S
Template Known Secondary structure																					.	.	.	.	.	.	.	.		S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													B	T	.	T	B
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20									.	.	.	.	.																								.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.
											84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	A	G	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.
Template Sequence		V	G	G	P	V	W	S	A	E	C	A	E	T	I	K	I	I	V	E	R	Y	L	A	P	H	L	L	G	T	D	A	F	N	V	S	G	A	L	Q	T	M	A	R	A	V	T	G	N	A	.	.	.	.	.	.	.	S	A	K	A	A	V	E	M	A	L	L	D	L	K	A	R	A	L	G	V	S	I	A	E
Template Known Secondary structure		S	T	T	T	T	T	S	S														T					T	T	S		T	T											T	T		S	S			.	.	.	.	.	.	.																		T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																	.	.	.																												.
Query SS confidence																	.	.	.																												.
Query Sequence		L	L	G	G	A	V	R	D	E	I	Q	F	Y	A	T	.	.	.	G	A	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	.	A	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N
Query Conservation																	.	.	.																												.
Alig confidence																	.	.	.																												.
Template Conservation
Template Sequence		L	L	G	G	P	L	R	S	A	I	P	I	A	W	T	L	A	S	G	D	T	K	R	D	L	D	S	A	V	E	M	I	E	R	R	R	H	N	R	F	K	V	K	L	G	F	R	S	P	Q	D	D	L	I	H	M	E	A	L	S	N	S	L	G	S	K	A	Y	L	R	V	D	V	N	Q	A	W	D	E	Q
Template Known Secondary structure			T	T			S		S				B						S	S															T	T	S									S	S	S																T	T	T	T	S							T	T				T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		Y	A	T	K	L	A	H	A	C	A	P	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V
Query Conservation																																																													.
Alig confidence																																					.	.																							.
Template Conservation																																					.	.
Template Sequence		V	A	S	V	Y	I	P	E	L	E	A	L	G	V	E	L	I	E	Q	P	V	G	R	E	N	T	Q	A	L	R	R	L	S	D	N	.	.	N	R	V	A	I	M	A	D	E	S	L	S	T	L	A	S	A	F	D	L	A	R	D	R	S	V	D	V	F	S	L	K	L	C	N	M	G	G	V	S	A	T	Q
Template Known Secondary structure												T	T	T								S		S	S												.	.		S	S					S	S	S			S									T	T	T			S										T	S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		E	I	A	A	I	A	K	S	R	G	Q	L	V	V	P	H	G	S	.	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E
Query Conservation																				.
Alig confidence																				.																														.																				.	.
Template Conservation																																																		.																				.	.
Template Sequence		K	I	A	A	V	A	E	A	S	G	I	A	S	Y	G	G	T	M	L	D	S	T	I	G	T	S	V	A	L	Q	L	Y	S	T	V	P	S	L	P	F	G	C	E	L	I	G	P	F	.	V	L	A	D	T	L	S	H	E	P	L	E	I	R	D	Y	E	L	Q	.	.	V	P	T	G	V	G	H	G	M	T
Template Known Secondary structure											T									S														T	T	S	S			T	T		B							.		B	S			S	B	S					B		S	S				.	.				S	S	S	T	T
Template Predicted Secondary structure																																																		.																				.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	R	D	C	N	L	K	R	P	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	E	D	K	V	R	Q	Y	A	R
Template Known Secondary structure		B
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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