Job Description P77215 Confidence 100.00% Date Thu Jan 5 12:26:27 GMT 2012 Rank 79 Aligned Residues 341 % Identity 16% Template c1jpmB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:l-ala-d/l-glu epimerase; PDBTitle: l-ala-d/l-glu epimerase Resolution 2.25 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	K	Q	V	R	A	W	F	T	G	G	A	T	A	E	K	G	A	G	G	G	D	Y	H	D	Q	G	A	N	H	W	I	D	D	H	I	A	T	P	M	S	K	Y	R	D	Y	E	Q	S	R	Q	S	F	G	I	N	V	L	G	T	L	V	V	E	V	E	A	E	N	G	Q	T	G	F	A	V	S	T	A
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	I	R	I	E	T	S	R	I	A	V	P	L	T	K	P	F	K	.	.	.	.	.	.	.	.	T	A	L	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	T	A	E	S	V	I	V	R	I	T	Y	D	S	G	A	V	G	W	G	E	A	P	P
Template Known Secondary structure		B																			.	.	.	.	.	.	.	.		S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20									.	.	.	.	.																								.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
		85									.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.
Query Sequence		G	.	.	.	.	.	.	.	.	E	M	G	C	F	I	V	E	K	H	L	N	R	F	I	E	G	K	C	V	S	D	I	K	L	I	H	D	Q	M	L	S	A	T	L	Y	Y	S	G	S	G	G	L	V	M	N	T	I	S	C	V	D	L	A	L	W	D	L	F	G	K	V	V	G	L	P	V	Y	K	L	L
Query Conservation			.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.
Template Sequence		T	L	V	I	T	G	D	S	M	D	S	I	E	S	A	I	H	H	V	L	K	P	A	L	L	G	K	S	L	A	G	Y	E	A	I	L	H	D	I	Q	H	L	L	T	G	N	M	.	.	.	.	.	.	.	S	A	K	A	A	V	E	M	A	L	Y	D	G	W	A	Q	M	C	G	L	P	L	Y	Q	M	L
Template Known Secondary structure		B	T	T	T	T		B												T						T	T		B	G	G	G											S	S	S	S			.	.	.	.	.	.	.																			T	S	B					T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																.	.																												.
Query SS confidence																.	.																												.
Query Sequence		G	G	A	V	R	D	E	I	Q	F	Y	A	T	G	.	.	A	R	P	D	L	A	K	E	M	G	F	I	G	G	K	M	P	T	H	W	G	P	H	D	G	D	A	.	G	I	R	K	D	A	A	M	V	A	D	M	R	E	K	C	G	E	D	F	W	L	M	L	D	C	W	M	S	Q	D	V	N	Y	A	T
Query Conservation																.	.																												.
Alig confidence					.											.	.																												.
Template Conservation					.
Template Sequence		G	G	Y	.	R	D	T	L	E	T	D	Y	T	V	S	V	N	S	P	E	E	M	A	A	D	A	E	N	Y	L	K	Q	G	F	Q	T	L	K	I	K	V	G	K	D	D	I	A	T	D	I	A	R	I	Q	E	I	R	K	R	V	G	S	A	V	K	L	R	L	D	A	N	Q	G	W	R	P	K	E	A	V
Template Known Secondary structure		T			.		S				B																						T	T									S	S	S																	G	G	G	S							T	T		S
Template Predicted Secondary structure					.
Template SS confidence
		124	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		234	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure										.	.																																																	.
Query SS confidence										.	.																																																	.
Query Sequence		K	L	A	H	A	C	A	P	.	.	Y	N	L	K	W	I	E	E	C	L	P	P	Q	Q	Y	E	S	Y	R	E	L	K	R	N	A	P	V	G	M	M	V	T	S	G	E	H	H	G	T	L	Q	S	F	R	T	L	S	E	.	T	G	I	D	I	M	Q	P	D	V	G	W	C	G	G	L	T	T	L	V	E
Query Conservation										.	.																																																	.
Alig confidence										.	.																									.	.																							.
Template Conservation																																				.	.
Template Sequence		T	A	I	R	K	M	E	D	A	G	L	G	I	E	L	V	E	Q	P	V	H	K	D	D	L	A	G	L	K	K	V	T	D	A	.	.	T	D	T	P	I	M	A	D	E	S	V	F	T	P	R	Q	A	F	E	V	L	Q	T	R	S	A	D	L	I	N	I	K	L	M	K	A	G	G	I	S	G	A	E	K
Template Known Secondary structure										T	T										S		T	T												.	.		S	S					S	T	T		S	S											T			S										T	S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		I	A	A	I	A	K	S	R	G	Q	L	V	V	P	H	G	S	.	S	V	Y	S	H	H	A	V	I	T	F	T	N	T	P	F	S	E	F	L	M	T	S	P	D	C	S	T	M	R	P	Q	F	D	P	I	L	L	N	E	P	V	P	V	N	G	R	I	H	K	S	V	L	D	K	P	G	F	G	V	E	L
Query Conservation																			.
Alig confidence																			.																										.	.																							.	.
Template Conservation																																													.	.																							.	.
Template Sequence		I	N	A	M	A	E	A	C	G	V	E	C	M	V	G	S	M	I	E	T	K	L	G	I	T	A	A	A	H	F	A	A	S	K	R	N	I	T	R	F	D	F	D	.	.	A	P	L	M	L	K	T	D	V	F	N	G	G	I	T	Y	S	G	S	T	I	S	.	.	M	P	G	K	P	G	L	G	I	I	G
Template Known Secondary structure									T	T								S	S																	T	T								.	.	G	G	G	G	B	S							S					T	T				.	.				S	S	B	T
Template Predicted Secondary structure																																													.	.																							.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.
		390
Predicted Secondary structure
Query SS confidence
Query Sequence		N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		357

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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