Job Description P62723 Confidence 9.03% Date Thu Jan 5 12:07:48 GMT 2012 Rank 23 Aligned Residues 68 % Identity 22% Template d1fftb2 SCOP info Transmembrane helix hairpin Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Resolution 3.50

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Show / Hide Conservation and Alignment quality

		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260													.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	D	A	E	N	A	A	V	I	S	K	M	L	R	V	M	M	L	A	P	F	L	I	L	L	A	A	R	V	.	.	.	.	K	Q	L	S	G	A	N	S	G	E	K	S	.	.	.	.	.	.	.	.	.	.	.	.	K	I	T	I	P	W	F	A	I	L	F	I	V	V	A	I	F	N	S	F	H	L
Query Conservation																																.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Q	I	G	L	E	Q	R	S	L	I	L	T	A	F	G	L	M	L	I	V	V	I	P	A	I	L	M	A	V	G	F	A	W	K	Y	R	A	S	N	K	D	A	K	Y	S	P	N	W	S	H	S	N	K	V	E	A	V	V	W	T	V	P	I	L	I	I	I	F	L	A	V	L	T	W	K	T	T	H	A
Template Known Secondary structure		S																	T	T	T	T	T	T								T	T	T	T	T	T	T	T	S	T	T	T		S	S								S						T	T																		S		T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		283	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	P	S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions