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Job DescriptionP62723
Confidence60.88%DateThu Jan 5 12:07:48 GMT 2012
Rank1Aligned Residues159
% Identity12%Templatec1zcdA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:na(+)/h(+) antiporter 1; PDBTitle: crystal structure of the na+/h+ antiporter nhaa
Resolution3.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.... .....80....
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Query Sequence  QHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGFSALTLAILLGMVLGNTIYPHIWKSCDGGVL. . . FAKQYLLRLG.
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Template Sequence  NLCGARRTGVYILVGVVLWTAVLKSG. . . . . . . . . VHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFA
Template Known Secondary structure  TT


TTTTS.........S


GGGSS
T
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   198.200.........210.........220... ......230.........240.........250.........260........
 
   85....90.........100.........110.........120....... ..130.........140.........150....
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Query Sequence  IILYGFRLTFSQIADVGISGIIIDVLTLSSTFLLACFLGQKVF. . . . . . . . . . GLDKHTSWLIGAGSSICGAAAVLATEP
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Template Sequence  FANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFIASL
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TSSTTTTTTGGGSTTTSS
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GGGGTTTT

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   269270.........280.........290.........300.........310.........320.........330.........340........
 
   155....160.........170......
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Query Sequence  VVKAEASKVTVAVATVVIFGTV
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Template Sequence  AFGSVDPELINWAKLGILVGSI
Template Known Secondary structure  STTSS
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   349350.........360.........370
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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