Return to main results Retrieve Phyre Job Id

Job DescriptionP76508
Confidence11.58%DateThu Jan 5 12:23:47 GMT 2012
Rank8Aligned Residues25
% Identity24%Templatec3trkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nonstructural polyprotein; PDBTitle: structure of the chikungunya virus nsp2 protease
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30
Predicted Secondary structure 






Query SS confidence 
























Query Sequence  LCSVVEASGASLEKGRHDQLLTALR
Query Conservation 
  
    
  


    

  

 
Alig confidence 
























Template Conservation 
 


 



 



 
  
  


Template Sequence  LVPILETAGIKLNDRQWSQIIQAFK
Template Known Secondary structure  TT




Template Predicted Secondary structure 





Template SS confidence 
























   1018.1020.........1030.........1040..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions