 |
Job Description | P27838 | Confidence | 6.07% | Date | Thu Jan 5 11:44:15 GMT 2012 |
Rank | 41 | Aligned Residues | 37 |
% Identity | 19% | Template | d2p3ya1 |
SCOP info | VPA0735-like
| VPA0735-like
| VPA0735-like
|
Resolution | 1.80 |
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . | |
. | . | . | . | . | 70 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  | . |  |  |  |
| . |
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
Query Sequence |   |
G | G | V | L | T | I | T | F | E | N | G | S | K | I | I | I | N | R | Q | E | P | L | H | Q | V | . |
W | L | A | T | . |
K | Q | G | G | Y | H | F | D | L | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | D | E | W | I |
Query Conservation |   |
  |
|
|
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |
|
| . |
|
|
|
| . |
|
|
|
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|   |   | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |
|   |
|   |
|
|
|
|   |
|   |   |   |   |
|
|
|
|
|   |
Template Sequence |   |
D | G | S | I | D | V | Y | Y | G | . |
. |
. |
. |
. |
. |
. |
P | K | P | V | K | G | Y | E | N | N | W | V | Q | T | N | P | G | E | G | W | F | T | Y | F | R | F | Y | G | P | T | E | K | X | F | D | K | S | W | T |
Template Known Secondary structure |   |
T | S |
|  |  |  |  |  | S | . | . | . | . | . | . | . | S | S |
|
| T | T |
| T | T | S | B |
|
|
|
| T | T |
| B |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  | T |
|
| S |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
428 | . | 430 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|