Job Description P27838 Confidence 3.60% Date Thu Jan 5 11:44:15 GMT 2012 Rank 86 Aligned Residues 33 % Identity 27% Template c2w56B_ PDB info PDB header:unknown function Chain: B: PDB Molecule:vc0508; PDBTitle: structure of the hypothetical protein vc0508 from vibrio cholerae2 vsp-ii pathogenicity island Resolution 1.90 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	L	W	L	T	I	E	E	R	L	D	D	W	D	G	D	S	D	I	D	C	E	I	N	G	G	V	L	T	I	T	F	E	N	G	S	K	I	I	I	N	R	Q	E	P	L	H	Q	V	W	L	A	T	K	Q	G	G	Y	H
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	L	H	K	L	L	S	E	Q	L	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Y	L	V	F	N	F	R	D	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	A	D	E	G	G	F	H
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B	T	T	T	B
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.														.	.	30	.	.	.	.	.	.	.	.															.	40	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions