 |
Job Description | P27838 | Confidence | 4.95% | Date | Thu Jan 5 11:44:15 GMT 2012 |
Rank | 55 | Aligned Residues | 19 |
% Identity | 21% | Template | c2df7H_ |
PDB info |
PDB header:virus like particle | Chain: H: PDB Molecule:structural polyprotein vp2; |
PDBTitle: crystal structure of infectious bursal disease virus vp2 subviral2 particle
|
Resolution | 2.60 Å |
|
  |   |
64 | . | . | . | |
|
. | . | 70 | . | . | . | |
. | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
|
|
|
| . | . |
|
|
|
|  |  | . |  |
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
| . |
. |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | K | Q | G | . |
. |
G | Y | H | F | D | L | . |
K | G | D | E | W | I | C | D | R |
Query Conservation |   |
|
|
|
| . | . |
|   |   |
|
|   | . |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|
|
|   |   |   |
|   |
|   |   |   |
|
|
|
Template Sequence |   |
F | P | G | S | I | V | G | A | H | Y | T | L | Q | S | N | G | N | Y | K | F | D | Q |
Template Known Secondary structure |   |
| S | S | S |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|